Estimating the Relative Contributions of New Genes from Retrotransposition and Segmental Duplication Events during Mammalian Evolution. - Jin Jun; Paul Ryvkin; Edward Hemphill; Ion I. Mandoiu; Craig E. Nelson (RECOMB-CG, 2008)

Duplication Mechanism and Disruptions in Flanking Regions Influence the Fate of Mammalian Gene Duplicates. - Paul Ryvkin; Jin Jun; Edward Hemphill; Craig E. Nelson (RECOMB-CG, 2008)

The Birth of New Genes by RNA- and DNA-Mediated Duplication during Mammalian Evolution. - Jin Jun; Paul Ryvkin; Edward Hemphill; Ion I. Mandoiu; Craig E. Nelson (J. Comput. Biol., 2009)

Duplication Mechanism and Disruptions in Flanking Regions Determine the Fate of Mammalian Gene Duplicates. - Jin Jun; Paul Ryvkin; Edward Hemphill; Craig E. Nelson (J. Comput. Biol., 2009)

SCLD: a stem cell lineage database for the annotation of cell types and developmental lineages. - Edward Hemphill; Asav P. Dharia; Chih Lee; Caroline M. Jakuba; Jason D. Gibson; Frederick W. Kolling IV; Craig E. Nelson (Nucleic Acids Res., 2011)

Feature selection and classifier performance on diverse bio- logical datasets. - Edward Hemphill; James Lindsay; Chih Lee; Ion I. Mandoiu; Craig E. Nelson (BMC Bioinform., 2014)