Detection of generic spaced motifs using submotif pattern mining. - Edward Wijaya; Kanagasabai Rajaraman; Siu-Ming Yiu; Wing-Kin Sung (Bioinform., 2007)

Modeling the Marginal Distribution of Gene Expression with Mixture Models. - Edward Wijaya; Hajime Harada; Paul Horton (FGCN (3: BSBT), 2008)

MotifVoter: a novel ensemble method for fine-grained integration of generic motif finders. - Edward Wijaya; Siu-Ming Yiu; Ngo Thanh Son; Kanagasabai Rajaraman; Wing-Kin Sung (Bioinform., 2008)

In search of true reads: A classification approach to next generation sequencing data selection. - Edward Wijaya; Jean-François Pessiot; Martin C. Frith; Wataru Fujibuchi; Kiyoshi Asai; Paul Horton (BIBM Workshops, 2010)

Probabilistic alignments with quality scores: an application to short-read mapping toward accurate SNP/indel detection. - Michiaki Hamada; Edward Wijaya; Martin C. Frith; Kiyoshi Asai (Bioinform., 2011)

RecountDB: a database of mapped and count corrected transcribed sequences. - Edward Wijaya; Martin C. Frith; Kiyoshi Asai; Paul Horton (Nucleic Acids Res., 2012)

Reference-free prediction of rearrangement breakpoint reads. - Edward Wijaya; Kana Shimizu; Kiyoshi Asai; Michiaki Hamada (Bioinform., 2014)

Bolt-On Global Consistency for the Cloud. - Zhe Wu 003; Edward Wijaya; Muhammed Uluyol; Harsha V. Madhyastha (SoCC, 2018)

A Novel Quantitative Evaluation of Bone Formation After Opening Wedge High Tibial Osteotomy Using Tomosynthesis. - Kyota Ishibashi; Eiji Sasaki; Edward Wijaya; Shohei Yamauchi; Shizuka Sasaki; Yuka Kimura; Yuji Yamamoto; Takashi Shimbo; Katsuto Tamai; Yasuyuki Ishibashi (J. Digit. Imaging, 2022)