The Cloud: Requirements for a Better Service. - Eileen Marie Hanna; Nader Mohamed; Jameela Al-Jaroodi (CCGRID, 2012)

ProRank+ - A Method for Detecting Protein Complexes in Protein Interaction Networks. - Eileen Marie Hanna; Nazar M. Zaki (BIOINFORMATICS, 2014)

Detecting protein complexes in protein interaction networks using a ranking algorithm with a refined merging procedure. - Eileen Marie Hanna; Nazar M. Zaki (BMC Bioinform., 2014)

Detecting protein complexes using gene expression biclusters. - Eileen Marie Hanna; Nazar M. Zaki (CIBCB, 2015)

To change or not to change? Modeling software system interactions using Temporal Graphs and Graph Neural Networks: A focus on change propagation. - Manuella Germanos; Danielle Azar; Eileen Marie Hanna (Inf. Softw. Technol., 2024)

Ant colony optimization for the identification of dysregulated gene subnetworks from expression data. - Eileen Marie Hanna; Ghadi El Hasbani; Danielle Azar (BMC Bioinform., 2024)