svist4get: a simple visualization tool for genomic tracks from sequencing experiments. - Artyom A. Egorov; Ekaterina A. Sakharova; Aleksandra S. Anisimova; Sergey E. Dmitriev; Vadim N. Gladyshev; Ivan V. Kulakovskiy (BMC Bioinform., 2019)

MGnify: the microbiome analysis resource in 2020. - Alex L. Mitchell; Alexandre Almeida; Martin Beracochea; Miguel A. Boland; Josephine Burgin; Guy Cochrane; Michael R. Crusoe; Varsha Kale; Simon C. Potter; Lorna J. Richardson; Ekaterina A. Sakharova; Maxim Scheremetjew; et al. (Nucleic Acids Res., 2020)

VIRify: An integrated detection, annotation and taxonomic classification pipeline using virus-specific protein profile hidden Markov models. - Guillermo Rangel-Pineros; Alexandre Almeida; Martin Beracochea; Ekaterina A. Sakharova; Manja Marz; Alejandro Reyes; Martin Hölzer; Robert D. Finn (PLoS Comput. Biol., 2023)

MGnify: the microbiome sequence data analysis resource in 2023. - Lorna J. Richardson; Ben Allen; Germana Baldi; Martin Beracochea; Maxwell L. Bileschi; Tony Burdett; Josephine Burgin; Juan Caballero; Guy Cochrane; Lucy J. Colwell; Tom Curtis; Alejandra Escobar-Zepeda; et al. (Nucleic Acids Res., 2023)