tcR: an R package for T cell receptor repertoire advanced data analysis. - Vadim Nazarov; Mikhail Pogorelyy; Ekaterina Komech; Ivan Zvyagin; Dmitry Bolotin; Mikhail Shugay; Dmitry Chudakov; Yuri B. Lebedev; Ilgar Z. Mamedov (BMC Bioinform., 2015)

Persisting fetal clonotypes influence the structure and overlap of adult human T cell receptor repertoires. - Mikhail V. Pogorelyy; Yuval Elhanati; Quentin Marcou; Anastasiia L. Sycheva; Ekaterina Komech; Vadim I. Nazarov; Olga V. Britanova; Dmitry M. Chudakov; Ilgar Z. Mamedov; Yuri B. Lebedev; Thierry Mora; Aleksandra M. Walczak (PLoS Comput. Biol., 2017)

VDJdb: a curated database of T-cell receptor sequences with known antigen specificity. - Mikhail Shugay; Dmitriy V. Bagaev; Ivan V. Zvyagin; Renske M. A. Vroomans; Jeremy Chase Crawford; Garry Dolton; Ekaterina Komech; Anastasiya L. Sycheva; Anna E. Koneva; Evgeniy S. Egorov; Alexey V. Eliseev; Ewald van Dyk; et al. (Nucleic Acids Res., 2018)