A Physicochemical Model for Analyzing DNA Sequences. - Samrat Dutta; Poonam Singhal; Praveen Agrawal; Raju Tomer; Kritee; Ekta Khurana; Bhyravabhotla Jayaram (J. Chem. Inf. Model., 2006)

Pseudofam: the pseudogene families database. - Hugo Y. K. Lam; Ekta Khurana; Gang Fang; Philip Cayting; Nicholas Carriero; Kei-Hoi Cheung; Mark B. Gerstein (Nucleic Acids Res., 2009)

Using semantic web rules to reason on an ontology of pseudogenes. - Matthew Holford; Ekta Khurana; Kei-Hoi Cheung; Mark Gerstein (Bioinform., 2010)

VAT: a computational framework to functionally annotate variants in personal genomes within a cloud-computing environment. - Lukas Habegger; Suganthi Balasubramanian; David Z. Chen; Ekta Khurana; Andrea Sboner; Arif Ozgun Harmanci; Joel S. Rozowsky; Declan Clarke; Michael Snyder 001; Mark Gerstein (Bioinform., 2012)

Interpretation of Genomic Variants Using a Unified Biological Network Approach. - Ekta Khurana; Yao Fu; Jieming Chen; Mark Gerstein (PLoS Comput. Biol., 2013)

Genomic basis for RNA alterations in cancer. - Claudia Calabrese; Natalie R. Davidson; Deniz Demircioglu; Nuno A. Fonseca; Yao He; André Kahles; Kjong-Van Lehmann; Fenglin Liu; Yuichi Shiraishi; Cameron M. Soulette; Lara Urban; Liliana Greger; et al. (Nat., 2020)

Analyses of non-coding somatic drivers in 2,658 cancer whole genomes. - Esther Rheinbay; Morten Muhlig Nielsen; Federico Abascal; Jeremiah Wala; Ofer Shapira; Grace Tiao; Henrik Hornshøj; Julian M. Hess; Randi Istrup Juul; Ziao Lin; Lars Feuerbach; Radhakrishnan Sabarinathan; et al. (Nat., 2020)

CNCDatabase: a database of non-coding cancer drivers. - Eric Minwei Liu; Alexander Martínez-Fundichely; Rajesh Bollapragada; Maurice Spiewack; Ekta Khurana (Nucleic Acids Res., 2021)