Genetic control of flower morphogenesis in Arabidopsis thaliana: a logical analysis. - Luis Mendoza; Denis Thieffry; Elena R. Álvarez-Buylla (Bioinform., 1999)

Interlinked nonlinear subnetworks underlie the formation of robust cellular patterns in Arabidopsis epidermis: a dynamic spatial model. - Mariana Benítez; Carlos Espinosa-Soto; Pablo Padilla-Longoria; Elena R. Álvarez-Buylla (BMC Syst. Biol., 2008)

Information flow during gene activation by signaling molecules: ethylene transduction in Arabidopsis cells as a study system. - José Díaz; Elena R. Álvarez-Buylla (BMC Syst. Biol., 2009)

Dynamic-module redundancy confers robustness to the gene regulatory network involved in hair patterning of Arabidopsis epidermis. - Mariana Benítez; Elena R. Álvarez-Buylla (Biosyst., 2010)

Single-cell and coupled GRN models of cell patterning in the Arabidopsis thaliana root stem cell niche. - Eugenio Azpeitia; Mariana Benítez; Iliusi Vega; Carlos Villarreal; Elena R. Álvarez-Buylla (BMC Syst. Biol., 2010)

"Antelope": a hybrid-logic model checker for branching-time Boolean GRN analysis. - Gustavo Arellano; Julián Argil; Eugenio Azpeitia; Mariana Benítez; Miguel Carrillo; Pedro Arturo Góngora; David A. Rosenblueth; Elena R. Álvarez-Buylla (BMC Bioinform., 2011)

Cell Patterns Emerge from Coupled Chemical and Physical Fields with Cell Proliferation Dynamics: The Arabidopsis thaliana Root as a Study System. - Rafael A. Barrio; José Roberto Romero-Arias; Marco A. Noguez; Eugenio Azpeitia; Elizabeth Ortiz-Gutiérrez; Valeria Hernández-Hernández; Yuriria Cortes-Poza; Elena R. Álvarez-Buylla (PLoS Comput. Biol., 2013)

Tetramer formation in Arabidopsis MADS domain proteins: analysis of a protein-protein interaction network. - Carlos Espinosa-Soto; Richard G. H. Immink; Gerco C. Angenent; Elena R. Álvarez-Buylla; Stefan de Folter (BMC Syst. Biol., 2014)

A model of the regulatory network involved in the control of the cell cycle and cell differentiation in the Caenorhabditis elegans vulva. - Nathan Weinstein; Elizabeth Ortiz-Gutiérrez; Stalin Muñoz; David A. Rosenblueth; Elena R. Álvarez-Buylla; Luis Mendoza (BMC Bioinform., 2015)

Reshaping the epigenetic landscape during early flower development: induction of attractor transitions by relative differences in gene decay rates. - Jose Davila-Velderrain; Carlos Villarreal; Elena R. Álvarez-Buylla (BMC Syst. Biol., 2015)

A Minimal Regulatory Network of Extrinsic and Intrinsic Factors Recovers Observed Patterns of CD4+ T Cell Differentiation and Plasticity. - Mariana Esther Martinez-Sanchez; Luis Mendoza; Carlos Villarreal; Elena R. Álvarez-Buylla (PLoS Comput. Biol., 2015)

A Dynamic Gene Regulatory Network Model That Recovers the Cyclic Behavior of Arabidopsis thaliana Cell Cycle. - Elizabeth Ortiz-Gutiérrez; Karla García-Cruz; Eugenio Azpeitia; Aaron Castillo; María de la Paz Sánchez; Elena R. Álvarez-Buylla (PLoS Comput. Biol., 2015)

The CD4+ T cell regulatory network mediates inflammatory responses during acute hyperinsulinemia: a simulation study. - Mariana Esther Martinez-Sanchez; Marcia Hiriart; Elena R. Álvarez-Buylla (BMC Syst. Biol., 2017)

Gene regulatory network underlying the immortalization of epithelial cells. - Luis Fernando Méndez-López; Jose Davila-Velderrain; Elisa Domínguez-Hüttinger; Christian Enríquez-Olguín; Juan Carlos Martínez-García; Elena R. Álvarez-Buylla (BMC Syst. Biol., 2017)

A dynamic genetic-hormonal regulatory network model explains multiple cellular behaviors of the root apical meristem of Arabidopsis thaliana. - Mónica L. García-Gómez; Eugenio Azpeitia; Elena R. Álvarez-Buylla (PLoS Comput. Biol., 2017)