Predicting protein phosphorylation sites in soybean using interpretable deep tabular learning network. - Elham Khalili; Shahin Ramazi; Faezeh Ghanati; Samaneh Kouchaki (Briefings Bioinform., 2022)

A review on antimicrobial peptides databases and the computational tools. - Shahin Ramazi; Neda Mohammadi; Abdollah Allahverdi; Elham Khalili; Parviz Abdolmaleki (Database J. Biol. Databases Curation, 2022)

Analysis and review of techniques and tools based on machine learning and deep learning for prediction of lysine malonylation sites in protein sequences. - Shahin Ramazi; Seyed Amir Hossein Tabatabaei; Elham Khalili; Amirhossein Golshan Nia; Kiomars Motarjem (Database J. Biol. Databases Curation, 2024)