Using a literature-based NMF model for discovering gene functional relationships. - Elina Tjioe; Michael W. Berry; Ramin Homayouni; Kevin Heinrich (BMC Bioinform., 2008)

Discovering gene functional relationships using FAUN (Feature Annotation Using Nonnegative matrix factorization). - Elina Tjioe; Michael W. Berry; Ramin Homayouni (BMC Bioinform., 2010)

MultiFit: a web server for fitting multiple protein structures into their electron microscopy density map. - Elina Tjioe; Keren Lasker; Ben M. Webb; Haim J. Wolfson; Andrej Sali (Nucleic Acids Res., 2011)

SALIGN: a web server for alignment of multiple protein sequences and structures. - Hannes Braberg; Benjamin M. Webb; Elina Tjioe; Ursula Pieper 001; Andrej Sali; Mallur S. Madhusudhan (Bioinform., 2012)