Selective Constraint on Noncoding Regions of Hominid Genomes. - Eliot C. Bush; Bruce T. Lahn (PLoS Comput. Biol., 2005)

Authors' Reply. - Eliot C. Bush; Bruce T. Lahn (PLoS Comput. Biol., 2006)

The Evolution of Word Composition in Metazoan Promoter Sequence. - Eliot C. Bush; Bruce T. Lahn (PLoS Comput. Biol., 2006)

When CS 1 is biology 1: crossdisciplinary collaboration as CS context. - Zachary Dodds; Ran Libeskind-Hadas; Eliot C. Bush (ITiCSE, 2010)

Context dependent substitution biases vary within the human genome. - P. Andrew Nevarez; Christopher M. DeBoever; Benjamin J. Freeland; Marissa A. Quitt; Eliot C. Bush (BMC Bioinform., 2010)

Pixels as polymers: unifying introductory biology and computer science through visual computation. - Zachary Dodds; Ran Libeskind-Hadas; Eliot C. Bush (J. Comput. Sci. Coll., 2011)

Bio1 as CS1: evaluating a crossdisciplinary CS context. - Zachary Dodds; Ran Libeskind-Hadas; Eliot C. Bush (ITiCSE, 2012)

A first course in computing with applications to biology. - Ran Libeskind-Hadas; Eliot C. Bush (Briefings Bioinform., 2013)

Biologically motivated problems for introductory computer science: conference tutorial. - Eliot C. Bush; Ran Libeskind-Hadas (J. Comput. Sci. Coll., 2015)

xenoGI: reconstructing the history of genomic island insertions in clades of closely related bacteria. - Eliot C. Bush; Anne E. Clark; Carissa A. DeRanek; Alexander Eng; Juliet Forman; Kevin N. Heath; Alexander B. Lee; Daniel M. Stoebel; Zunyan Wang; Matthew Wilber; Helen Wu (BMC Bioinform., 2018)

A Biology-based CS1: Results and Reflections, Ten Years In. - Zachary Dodds; Malia Morgan; Lindsay Popowski; Henry Coxe; Caroline Coxe; Kewei Zhou; Eliot C. Bush; Ran Libeskind-Hadas (SIGCSE, 2021)

Maximum parsimony reconciliation in the DTLOR model. - Jingyi Liu; Ross Mawhorter; Nuo Liu; Santi Santichaivekin; Eliot C. Bush; Ran Libeskind-Hadas (BMC Bioinform., 2021)

xenoGI 3: using the DTLOR model to reconstruct the evolution of gene families in clades of microbes. - Nuo Liu; Tonatiuh A. Gonzalez; Jacob Fischer; Chan Hong; Michelle Johnson; Ross Mawhorter; Fabrizia Mugnatto; Rachael Soh; Shifa Somji; Joseph S. Wirth; Ran Libeskind-Hadas; Eliot C. Bush (BMC Bioinform., 2023)