Leveraging Ontologies within the National Microbiome Data Collaborative. - William D. Duncan; Faiza Ahmed; Fnu Anubhav; Jeffrey Baumes; Jonathan Beezley; Mark Borkum; Lisa M. Bramer; Shane Canon; Patrick S. G. Chain; Danielle Christianson; Yuri Corilo; Karen Davenport; et al. (ICBO, 2021)

Planet Microbe: a platform for marine microbiology to discover and analyze interconnected 'omics and environmental data. - Alise J. Ponsero; Matthew Bomhoff; Kai Lewis Blumberg; Ken Youens-Clark; Nina M. Herz; Elisha M. Wood-Charlson; Edward F. Delong; Bonnie L. Hurwitz (Nucleic Acids Res., 2021)

The ModelSEED Biochemistry Database for the integration of metabolic annotations and the reconstruction, comparison and analysis of metabolic models for plants, fungi and microbes. - Samuel M. D. Seaver; Filipe Liu; Qizhi Zhang; James G. Jeffryes; José P. Faria; Janaka N. Edirisinghe; Michael B. Mundy; Nicholas Chia; Elad Noor; Moritz Emanuel Beber; Aaron A. Best; Matthew DeJongh; et al. (Nucleic Acids Res., 2021)

The ModelSEED Biochemistry Database for the integration of metabolic annotations and the reconstruction, comparison and analysis of metabolic models for plants, fungi and microbes (Corrigendum). - Samuel M. D. Seaver; Filipe Liu; Qizhi Zhang; James G. Jeffryes; José P. Faria; Janaka N. Edirisinghe; Michael B. Mundy; Nicholas Chia; Elad Noor; Moritz Emanuel Beber; Aaron A. Best; Matthew DeJongh; et al. (Nucleic Acids Res., 2021)

A roadmap for the functional annotation of protein families: a community perspective. - Valérie de Crécy-Lagard; Rocio Amorin de Hegedus; Cecilia N. Arighi; Jill Babor; Alex Bateman; Ian Blaby; Crysten Blaby-Haas; Alan J. Bridge; Stephen K. Burley; Stacey Cleveland; Lucy J. Colwell; Ana Conesa; et al. (Database J. Biol. Databases Curation, 2022)

Ten simple rules for getting and giving credit for data. - Elisha M. Wood-Charlson; Zachary Crockett; Chris Erdmann; Adam P. Arkin; Carly B. Robinson (PLoS Comput. Biol., 2022)

kb_DRAM: annotation and metabolic profiling of genomes with DRAM in KBase. - Michael Shaffer; Mikayla A. Borton; Ben Bolduc; José P. Faria; Rory M. Flynn; Parsa Ghadermazi; Janaka N. Edirisinghe; Elisha M. Wood-Charlson; Christopher S. Miller; Siu Hung Joshua Chan; Matthew B. Sullivan; Christopher S. Henry; et al. (Bioinform., 2023)