Predicting gene targets of perturbations via network-based filtering of mRNA expression compendia. - Elissa J. Cosgrove; Yingchun Zhou; Timothy S. Gardner; Eric D. Kolaczyk (Bioinform., 2008)

Many Microbe Microarrays Database: uniformly normalized Affymetrix compendia with structured experimental metadata. - Jeremiah J. Faith; Michael E. Driscoll; Vincent A. Fusaro; Elissa J. Cosgrove; Boris Hayete; Frank S. Juhn; Stephen J. Schneider; Timothy S. Gardner (Nucleic Acids Res., 2008)

On the Choice and Number of Microarrays for Transcriptional Regulatory Network Inference. - Elissa J. Cosgrove; Timothy S. Gardner; Eric D. Kolaczyk (BMC Bioinform., 2010)