Primaclade - a flexible tool to find conserved PCR primers across multiple species. - Michael D. Gadberry; Simon T. Malcomber; Andrew N. Doust; Elizabeth A. Kellogg (Bioinform., 2005)

The Plant Ontology Database: a community resource for plant structure and developmental stages controlled vocabulary and annotations. - Shulamit Avraham; Chih-Wei Tung; Katica Ilic; Pankaj Jaiswal; Elizabeth A. Kellogg; Susan McCouch; Anuradha Pujar; Leonore Reiser; Seung Yon Rhee; Martin M. Sachs; Mary L. Schaeffer; Lincoln Stein; et al. (Nucleic Acids Res., 2008)

Plant Structure Ontology (PSO) - A Morphological and Anatomical Ontology of Flowering Plants. - Katica Ilic; Seung Yon Rhee; Elizabeth A. Kellogg; Peter F. Stevens (Anatomy Ontologies for Bioinformatics, 2008)

Verdant: automated annotation, alignment and phylogenetic analysis of whole chloroplast genomes. - Michael R. McKain; Ryan H. Hartsock; Molly M. Wohl; Elizabeth A. Kellogg (Bioinform., 2017)