VERA: agent-based modeling transmission of antibiotic resistance between human pathogens and gut microbiota. - Oksana E. Glushchenko; Nikita A. Prianichnikov; Evgenii I Olekhnovich; Alexander I Manolov; Alexander V. Tyakht; Elizaveta V. Starikova; Vera Odintsova; Elena S. Kostryukova; Elena Ilina (Bioinform., 2019)

Phigaro: high-throughput prophage sequence annotation. - Elizaveta V. Starikova; Polina O. Tikhonova; Nikita A. Prianichnikov; Chris M. Rands; Evgeny M. Zdobnov; Elena N. Ilina; Vadim M. Govorun (Bioinform., 2020)