Supervised learning on phylogenetically distributed data. - Elliot Layne; Erika N. Dort; Richard C. Hamelin; Yue Li; Mathieu Blanchette (Bioinform., 2020)

PhyloGFN: Phylogenetic inference with generative flow networks. - Ming-Yang Zhou; Zichao Yan; Elliot Layne; Nikolay Malkin; Dinghuai Zhang; Moksh Jain; Mathieu Blanchette; Yoshua Bengio (ICLR, 2024)

Leveraging Structure Between Environments: Phylogenetic Regularization Incentivizes Disentangled Representations. - Elliot Layne; Jason S. Hartford; Sébastien Lachapelle; Mathieu Blanchette; Dhanya Sridhar (CoRR, 2024)

Sparsity regularization via tree-structured environments for disentangled representations. - Elliot Layne; Jason S. Hartford; Sébastien Lachapelle; Mathieu Blanchette; Dhanya Sridhar (Trans. Mach. Learn. Res., 2025)