De novo co-assembly of bacterial genomes from multiple single cells. - Narjes S. Movahedi; Elmirasadat Forouzmand; Hamidreza Chitsaz (BIBM, 2012)

The RNA Newton polytope and learnability of energy parameters. - Elmirasadat Forouzmand; Hamidreza Chitsaz (Bioinform., 2013)

An Efficient Algorithm for Upper Bound on the Partition Function of Nucleic Acids. - Hamidreza Chitsaz; Elmirasadat Forouzmand; Gholamreza Haffari (J. Comput. Biol., 2013)