CELLE-2: Translating Proteins to Pictures and Back with a Bidirectional Text-to-Image Transformer. - Emaad Khwaja; Yun Song; Aaron Agarunov; Bo Huang (NeurIPS, 2023)

CELL-E: A Text-to-Image Transformer for Protein Image Prediction. - Emaad Khwaja; Yun S. Song; Bo Huang (RECOMB, 2024)

Layered Diffusion Model for One-Shot High Resolution Text-to-Image Synthesis. - Emaad Khwaja; Abdullah Rashwan; Ting Chen; Oliver Wang; Suraj Kothawade; Yeqing Li (CoRR, 2024)

Toto: Time Series Optimized Transformer for Observability. - Ben Cohen; Emaad Khwaja; Kan Wang; Charles Masson; Elise Ramé; Youssef Doubli; Othmane Abou-Amal (CoRR, 2024)

This Time is Different: An Observability Perspective on Time Series Foundation Models. - Ben Cohen; Emaad Khwaja; Youssef Doubli; Salahidine Lemaachi; Chris Lettieri; Charles Masson; Hugo Miccinilli; Elise Ramé; Qiqi Ren; Afshin Rostamizadeh; Jean Ogier du Terrail; Anna-Monica Toon; et al. (CoRR, 2025)