High Performance Computing with Coarse Grained Model of Biological Macromolecules. - Emilia A. Lubecka; Adam K. Sieradzan; Cezary Czaplewski; Pawel Krupa; Adam Liwo (Supercomput. Front. Innov., 2018)

Introduction of a bounded penalty function in contact-assisted simulations of protein structures to omit false restraints. - Emilia A. Lubecka; Adam Liwo (J. Comput. Chem., 2019)

Improved Consensus-Fragment Selection in Template-Assisted Prediction of Protein Structures with the UNRES Force Field in CASP13. - Agnieszka S. Karczynska; Karolina Zieba; Urszula Uciechowska; Magdalena A. Mozolewska; Pawel Krupa; Emilia A. Lubecka; Agnieszka G. Lipska; Celina Sikorska; Sergey A. Samsonov; Adam K. Sieradzan; Artur Gieldon; Adam Liwo; et al. (J. Chem. Inf. Model., 2020)

ESCASA: Analytical estimation of atomic coordinates from coarse-grained geometry for nuclear-magnetic-resonance-assisted protein structure modeling. I. Backbone and Hβ protons. - Emilia A. Lubecka; Adam Liwo (J. Comput. Chem., 2021)

A coarse-grained approach to NMR-data-assisted modeling of protein structures. - Emilia A. Lubecka; Adam Liwo (J. Comput. Chem., 2022)

Optimization of parallel implementation of UNRES package for coarse-grained simulations to treat large proteins. - Adam K. Sieradzan; Jordi Sans-Duñó; Emilia A. Lubecka; Cezary Czaplewski; Agnieszka G. Lipska; Henryk Leszczynski; Krzysztof M. Ocetkiewicz; Jerzy Proficz; Pawel Czarnul; Henryk Krawczyk; Adam Liwo (J. Comput. Chem., 2023)