The Prisoners Dilemma, Memory, and the Early Evolution of Intelligence. - Charles Ofria; Laura M. Grabowski; Joshua R. Nahum; Riley Annis; Emily L. Dolson; Mikaela Leas (ALIFE, 2016)

The Effects of Evolution and Spatial Structure on Diversity in Biological Reserves. - Charles Ofria; Michael J. Wiser; Emily L. Dolson (ALIFE, 2016)

Open-Ended Evolution: Perspectives from the OEE Workshop in York. - Tim Taylor 001; Mark A. Bedau; Alastair Channon; David H. Ackley; Wolfgang Banzhaf; Guillaume Beslon; Emily L. Dolson; Tom Froese; Simon J. Hickinbotham; Takashi Ikegami; Barry McMullin; Norman H. Packard; et al. (Artif. Life, 2016)

Spatial resource heterogeneity creates local hotspots of evolutionary potential. - Emily L. Dolson; Charles Ofria (ECAL, 2017)

Applying Ecological Principles to Genetic Programming. - Emily L. Dolson; Wolfgang Banzhaf; Charles Ofria (GPTP, 2017)

Ecological theory provides insights about evolutionary computation. - Emily L. Dolson; Charles Ofria (GECCO (Companion), 2018)

Visualizing the tape of life: exploring evolutionary history with virtual reality. - Emily L. Dolson; Charles Ofria (GECCO (Companion), 2018)

Synthesizing Research on the Generation and Maintenance of Population Diversity. - Emily L. Dolson; Charles Ofria (ALIFE, 2018)

Ecological theory provides insights about evolutionary computation. - Emily L. Dolson; Wolfgang Banzhaf; Charles Ofria (PeerJ Prepr., 2018)

Quantifying the tape of life: Ancestry-based metrics provide insights and intuition about evolutionary dynamics. - Emily L. Dolson; Alexander Lalejini; Steven Jorgensen; Charles Ofria (PeerJ Prepr., 2018)

Exploring genetic programming systems with MAP-Elites. - Emily L. Dolson; Alexander Lalejini; Charles Ofria (PeerJ Prepr., 2018)

Random subsampling improves performance in lexicase selection. - Jose Guadalupe Hernandez; Alexander Lalejini; Emily L. Dolson; Charles Ofria (GECCO (Companion), 2019)

Characterizing the Effects of Random Subsampling on Lexicase Selection. - Austin J. Ferguson; Jose Guadalupe Hernandez; Daniel Junghans; Alexander Lalejini; Emily L. Dolson; Charles Ofria (GPTP, 2019)

Data Standards for Artificial Life Software. - Alexander Lalejini; Emily L. Dolson; Clifford Bohm; Austin J. Ferguson; David P. Parsons; Penelope Faulkner Rainford; Paul Richmond; Charles Ofria (ALIFE, 2019)

The MODES Toolbox: Measurements of Open-Ended Dynamics in Evolving Systems. - Emily L. Dolson; Anya E. Vostinar; Michael J. Wiser; Charles Ofria (Artif. Life, 2019)

An introduction to using counterdiabatic driving to eliminate genetic lag in changing environments. - Emily L. Dolson; Shamreen Iram; Joshua Chiel; Julia Pelesko; Nikhil Krishnan; Özenç Güngör; Benjamin Kuznets-Speck; Sebastian Deffner; Efe Ilker; Jacob G. Scott; Michael Hinczewski (ALIFE, 2020)

Interpreting the Tape of Life: Ancestry-Based Analyses Provide Insights and Intuition about Evolutionary Dynamics. - Emily L. Dolson; Alexander Lalejini; Steven Jorgensen; Charles Ofria (Artif. Life, 2020)

What Can Phylogenetic Metrics Tell us About Useful Diversity in Evolutionary Algorithms? - Jose Guadalupe Hernandez; Alexander Lalejini; Emily L. Dolson (GPTP, 2021)

Phylogenetic diversity predicts future success in evolutionary computation. - Jose Guadalupe Hernandez; Alexander Lalejini; Emily L. Dolson (GECCO Companion, 2022)

Selection schemes from evolutionary computing show promise for directed evolution of microbes. - Alexander Lalejini; Emily L. Dolson; Anya E. Vostinar; Luis Zaman (GECCO Companion, 2022)

Hereditary stratigraphy: genome annotations to enable phylogenetic inference over distributed populations. - Matthew Andres Moreno; Emily L. Dolson; Charles Ofria (GECCO Companion, 2022)

Untangling phylogenetic diversity's role in evolutionary computation using a suite of diagnostic fitness landscapes. - Shakiba Shahbandegan; Jose Guadalupe Hernandez; Alexander Lalejini; Emily L. Dolson (GECCO Companion, 2022)

Book Review: the evolution of complexity. - Emily L. Dolson (Genet. Program. Evolvable Mach., 2022)

hstrat: a Python Package for phylogenetic inference on distributed digital evolution populations. - Matthew Andres Moreno; Emily L. Dolson; Charles Ofria (J. Open Source Softw., 2022)

Calculating lexicase selection probabilities is NP-Hard. - Emily L. Dolson (GECCO, 2023)

Using Evolutionary Computation to Find Parameters that Promote Egalitarian Major Evolutionary Transitions. - Max Foreback; Sydney Leither; Emily L. Dolson (GECCO Companion, 2023)

Theoretical Limits on the Success of Lexicase Selection Under Contradictory Objectives. - Shakiba Shahbandegan; Emily L. Dolson (GECCO Companion, 2023)

Reachability Analysis for Lexicase Selection via Community Assembly Graphs. - Emily L. Dolson; Alexander Lalejini (GPTP, 2023)

Phylogeny-Informed Fitness Estimation for Test-Based Parent Selection. - Alexander Lalejini; Matthew Andres Moreno; Jose Guadalupe Hernandez; Emily L. Dolson (GPTP, 2023)

Phylogeny-informed fitness estimation. - Alexander Lalejini; Matthew Andres Moreno; Jose Guadalupe Hernandez; Emily L. Dolson (CoRR, 2023)

Runtime phylogenetic analysis enables extreme subsampling for test-based problems. - Alexander Lalejini; Marcos Sanson; Jack Garbus; Matthew Andres Moreno; Emily L. Dolson (GECCO Companion, 2024)

Evolving Weighted and Directed Graphs with Constrained Properties. - Sydney Leither; Vincent R. Ragusa; Emily L. Dolson (GECCO Companion, 2024)

Trackable Island-model Genetic Algorithms at Wafer Scale. - Matthew Andres Moreno; Connor Yang; Emily L. Dolson; Luis Zaman (GECCO Companion, 2024)

On the robustness of lexicase selection to contradictory objectives. - Shakiba Shahbandegan; Emily L. Dolson (GECCO, 2024)

Analysis of Phylogeny Tracking Algorithms for Serial and Multiprocess Applications. - Matthew Andres Moreno; Santiago Rodriguez Papa; Emily L. Dolson (CoRR, 2024)

Algorithms for Efficient, Compact Online Data Stream Curation. - Matthew Andres Moreno; Santiago Rodriguez Papa; Emily L. Dolson (CoRR, 2024)

Trackable Agent-based Evolution Models at Wafer Scale. - Matthew Andres Moreno; Connor Yang; Emily L. Dolson; Luis Zaman (CoRR, 2024)

Phylotrack: C++ and Python libraries for in silico phylogenetic tracking. - Emily L. Dolson; Santiago Rodriguez Papa; Matthew Andres Moreno (CoRR, 2024)

A Guide to Tracking Phylogenies in Parallel and Distributed Agent-based Evolution Models. - Matthew Andres Moreno; Anika Ranjan; Emily L. Dolson; Luis Zaman (CoRR, 2024)

Structured Downsampling for Fast, Memory-efficient Curation of Online Data Streams. - Matthew Andres Moreno; Luis Zaman; Emily L. Dolson (CoRR, 2024)

Empirical: A scientific software library for research, education, and public engagement. - Anya E. Vostinar; Alexander Lalejini; Charles Ofria; Emily L. Dolson; Matthew Andres Moreno (J. Open Source Softw., 2024)

Ecology, Spatial Structure, and Selection Pressure Induce Strong Signatures in Phylogenetic Structure. - Matthew Andres Moreno; Santiago Rodriguez Papa; Emily L. Dolson (Artif. Life, 2025)

The Robustness of Structural Features in Species Interaction Networks. - Sanaz Hasanzadeh Fard; Emily L. Dolson (CoRR, 2025)

Downstream: efficient cross-platform algorithms for fixed-capacity stream downsampling. - Connor Yang; Joey Wagner; Emily L. Dolson; Luis Zaman; Matthew Andres Moreno (CoRR, 2025)