HotSprint: database of computational hot spots in protein interfaces. - Emre Guney; Nurcan Tuncbag; Ozlem Keskin; Attila Gürsoy (Nucleic Acids Res., 2008)

Biana: a software framework for compiling biological interactions and analyzing networks. - Javier García-García 002; Emre Guney; Ramon Aragues; Joan Planas-Iglesias; Baldo Oliva (BMC Bioinform., 2010)

Toward PWAS: discovering pathways associated with human disorders. - Emre Guney; Baldo Oliva (BMC Bioinform., 2011)

GUILDify: a web server for phenotypic characterization of genes through biological data integration and network-based prioritization algorithms. - Emre Guney; Javier García-García 002; Baldo Oliva (Bioinform., 2014)

Highlights from the ISCB Student Council Symposium 2013. - Tomás Di Domenico; Cynthia Prudence; Esmeralda Vicedo; Emre Guney; Anupama Jigisha; Avinash Kumar Shanmugam (BMC Bioinform., 2014)

Reproducible Drug Repurposing: When Similarity Does Not Suffice. - Emre Guney (PSB, 2017)

The ISCB Student Council Internship Program: Expanding computational biology capacity worldwide. - Anupama Jigisha; Margherita Francescatto; Farzana Rahman; Nazeefa Fatima; Dan F. DeBlasio; Avinash Kumar Shanmugam; Venkata P. Satagopam; Alberto Santos; Pandurang Kolekar; Magali Michaut; Emre Guney (PLoS Comput. Biol., 2018)

Sex and gender differences and biases in artificial intelligence for biomedicine and healthcare. - Davide Cirillo; Silvina Catuara-Solarz; Czuee Morey; Emre Guney; Laia Subirats; Simona Mellino; Annalisa Gigante; Alfonso Valencia; María-José Rementeria; Antonella Santuccione Chadha; Nikolaos Mavridis (npj Digit. Medicine, 2020)