The domain-server: direct prediction of protein domain-homologies from BLAST search. - János Murvai; Kristian Vlahovicek; Endre Barta; Subbiah Parthasarathy; Hedvig Hegyi; Friedhelm Pfeiffer; Sándor Pongor (Bioinform., 1999)

The SBASE protein domain library, release 6.0: a collection of annotated protein sequence segments. - János Murvai; Kristian Vlahovicek; Endre Barta; Csaba Szepesvári; Cristina Acatrinei; Sándor Pongor (Nucleic Acids Res., 1999)

The SBASE protein domain library, release 7.0: a collection of annotated protein sequence segments. - János Murvai; Kristian Vlahovicek; Endre Barta; Bruno Cataletto; Sándor Pongor (Nucleic Acids Res., 2000)

The SBASE protein domain library, release 8.0: a collection of annotated protein sequence segments. - János Murvai; Kristian Vlahovicek; Endre Barta; Sándor Pongor (Nucleic Acids Res., 2001)

The SBASE protein domain library, release 9.0: an online resource for protein domain identification. - Kristian Vlahovicek; János Murvai; Endre Barta; Sándor Pongor (Nucleic Acids Res., 2002)

IS: a web-site for intron statistics. - Endre Barta; László Kaján; Sándor Pongor (Bioinform., 2003)

DoOP: Databases of Orthologous Promoters, collections of clusters of orthologous upstream sequences from chordates and plants. - Endre Barta; Endre Sebestyén; Tamás B. Pálfy; Gábor Tóth; Csaba P. Ortutay; László Patthy (Nucleic Acids Res., 2005)

PLOTREP: a web tool for defragmentation and visual analysis of dispersed genomic repeats. - Gábor Tóth; Gábor Deák; Endre Barta; György B. Kiss (Nucleic Acids Res., 2006)

DoOPSearch: a web-based tool for finding and analysing common conserved motifs in the promoter regions of different chordate and plant genes. - Endre Sebestyén; Tibor Nagy; Sándor Suhai; Endre Barta (BMC Bioinform., 2009)

ChIPSummitDB: a ChIP-seq-based database of human transcription factor binding sites and the topological arrangements of the proteins bound to them. - Erik Czipa; Mátyás Schiller; Tibor Nagy; Levente Kontra; László Steiner; Júlia Koller; Orsolya Pálné-Szén; Endre Barta (Database J. Biol. Databases Curation, 2020)

The ELIXIR Biodiversity Community: Understanding short- and long-term changes in biodiversity. - Robert M. Waterhouse; Anne-Françoise Adam-Blondon; Bachir Balech; Endre Barta; Katharina F. Heil; Graham M. Hughes; Lars S. Jermiin; Matús Kalas; Jerry Lanfear; Evangelos Pafilis; Aristotelis C. Papageorgiou; Fotis E. Psomopoulos; et al. (F1000Research, 2023)