DoOP: Databases of Orthologous Promoters, collections of clusters of orthologous upstream sequences from chordates and plants. - Endre Barta; Endre Sebestyén; Tamás B. Pálfy; Gábor Tóth; Csaba P. Ortutay; László Patthy (Nucleic Acids Res., 2005)

DoOPSearch: a web-based tool for finding and analysing common conserved motifs in the promoter regions of different chordate and plant genes. - Endre Sebestyén; Tibor Nagy; Sándor Suhai; Endre Barta (BMC Bioinform., 2009)

Ten simple rules to initiate and run a postdoctoral association. - Chiara Bruckmann; Endre Sebestyén (PLoS Comput. Biol., 2017)

SplicingFactory - splicing diversity analysis for transcriptome data. - Benedek Dankó; Péter Szikora; Tamás Pór; Alexa Szeifert; Endre Sebestyén (Bioinform., 2022)