Systems medicine of inflammaging. - Gastone C. Castellani; Giulia Menichetti; Paolo Garagnani; Maria Giulia Bacalini; Chiara Pirazzini; Claudio Franceschi; Sebastiano Collino; Claudia Sala; Daniel Remondini; Enrico Giampieri; Ettore Mosca; Matteo Bersanelli; et al. (Briefings Bioinform., 2016)

Methods for the integration of multi-omics data: mathematical aspects. - Matteo Bersanelli; Ettore Mosca; Daniel Remondini; Enrico Giampieri; Claudia Sala; Gastone C. Castellani; Luciano Milanesi (BMC Bioinform., 2016)

Stochastic neutral modelling of the Gut Microbiota's relative species abundance from next generation sequencing data. - Claudia Sala; Silvia Vitali; Enrico Giampieri; Ìtalo Faria do Valle; Daniel Remondini; Paolo Garagnani; Matteo Bersanelli; Ettore Mosca; Luciano Milanesi; Gastone C. Castellani (BMC Bioinform., 2016)

Optimized pipeline of MuTect and GATK tools to improve the detection of somatic single nucleotide polymorphisms in whole-exome sequencing data. - Ìtalo Faria do Valle; Enrico Giampieri; Giorgia Simonetti; Antonella Padella; Marco Manfrini; Anna Ferrari; Cristina Papayannidis; Isabella Zironi; Marianna Garonzi; Simona Bernardi 002; Massimo Delledonne; Giovanni Martinelli; et al. (BMC Bioinform., 2016)

Cross-Environment Comparison of a Bioinformatics Pipeline: Perspectives for Hybrid Computations. - Nico Curti; Enrico Giampieri; Andrea Ferraro; Maria Cristina Vistoli; Elisabetta Ronchieri; Daniele Cesini; Barbara Martelli; Cristina Duma Doina; Gastone C. Castellani (Euro-Par Workshops, 2018)

WISDoM: Characterizing Neurological Time Series With the Wishart Distribution. - Carlo Mengucci; Daniel Remondini; Gastone C. Castellani; Enrico Giampieri (Frontiers Neuroinformatics, 2020)

rFBP: Replicated Focusing Belief Propagation algorithm. - Nico Curti; Daniele Dall'Olio; Daniel Remondini; Gastone C. Castellani; Enrico Giampieri (J. Open Source Softw., 2020)

Impact of concurrency on the performance of a whole exome sequencing pipeline. - Daniele Dall'Olio; Nico Curti; Eugenio Fonzi; Claudia Sala; Daniel Remondini; Gastone C. Castellani; Enrico Giampieri (BMC Bioinform., 2021)

Correction to: Impact of concurrency on the performance of a whole exome sequencing pipeline. - Daniele Dall'Olio; Nico Curti; Eugenio Fonzi; Claudia Sala; Daniel Remondini; Gastone C. Castellani; Enrico Giampieri (BMC Bioinform., 2021)

Study of Wound Healing Dynamics by Single Pseudo-Particle Tracking in Phase Contrast Images Acquired in Time-Lapse. - Riccardo Scheda; Silvia Vitali; Enrico Giampieri; Gianni Pagnini; Isabella Zironi (Entropy, 2021)

COVID-19 Lung Segmentation. - Riccardo Biondi; Nico Curti; Enrico Giampieri; Gastone C. Castellani (J. Open Source Softw., 2021)

Effectiveness of Biologically Inspired Neural Network Models in Learning and Patterns Memorization. - Lorenzo Squadrani; Nico Curti; Enrico Giampieri; Daniel Remondini; Brian S. Blais; Gastone C. Castellani (Entropy, 2022)

Survival Model Optimization via Federated Learning: A Study Combining Simulations and Experiments. - Francesco Casadei; Luciana Carota; Gianluca Asti; Saverio D'Amico; Davide Piscia; Santiago Zazo; Patricia A. Apellániz; Juan Parras; Claudia Sala; Cesare Rollo; Nono S. C. Merleau; Piero Fariselli; et al. (IEEE Big Data, 2024)

Data Science for Health Image Alignment: A User-Friendly Open-Source ImageJ/Fiji Plugin for Aligning Multimodality/Immunohistochemistry/Immunofluorescence 2D Microscopy Images. - Filippo Piccinini; Marcella Tazzari; Maria Maddalena Tumedei; Mariachiara Stellato; Daniel Remondini; Enrico Giampieri; Giovanni Martinelli; Gastone C. Castellani; Antonella Carbonaro (Sensors, 2024)

Covering Hierarchical Dirichlet Mixture Models on binary data to enhance genomic stratifications in onco-hematology. - Daniele Dall'Olio; J. Eric Sträng; Amin T. Turki; Jesse M. Tettero; Martje Barbus; Renate Schulze-Rath; Javier Martinez Elicegui; Tommaso Matteuzzi; Alessandra Merlotti; Luciana Carota; Claudia Sala; Matteo G. Della Porta; et al. (PLoS Comput. Biol., 2024)

Automated Prediction of Photographic Wound Assessment Tool in Chronic Wound Images. - Nico Curti; Yuri Merli; Corrado Zengarini; Michela Starace; Luca Rapparini; Emanuela Marcelli; Gianluca Carlini; Daniele Buschi; Gastone C. Castellani; Bianca Maria Piraccini; Tommaso Bianchi; Enrico Giampieri (J. Medical Syst., 2024)