Accurate estimation of isoelectric point of protein and peptide based on amino acid sequences. - Enrique Audain; Yassel Ramos; Henning Hermjakob; Darren R. Flower; Yasset Pérez-Riverol (Bioinform., 2016)

The PRIDE database and related tools and resources in 2019: improving support for quantification data. - Yasset Pérez-Riverol; Attila Csordas; Jingwen Bai 003; Manuel Bernal Llinares; Suresh Hewapathirana; Deepti Jaiswal Kundu; Avinash Inuganti; Johannes Griss; Gerhard Mayer; Martin Eisenacher; Enrique Pérez; Julian Uszkoreit; et al. (Nucleic Acids Res., 2019)

The omics discovery REST interface. - Gaurhari Dass; Manh-Tu Vu; Pan Xu; Enrique Audain; Marc-Phillip Hitz; Björn A. Grüning; Henning Hermjakob; Yasset Pérez-Riverol (Nucleic Acids Res., 2020)

Generation of ENSEMBL-based proteogenomics databases boosts the identification of non-canonical peptides. - Husen M. Umer; Enrique Audain; Yafeng Zhu; Julianus Pfeuffer; Timo Sachsenberg; Janne Lehtiö; Rui Mamede Branca; Yasset Pérez-Riverol (Bioinform., 2022)