Three-dimensional visualization of many-body system dynamics. - Massimo Bernaschi; Enzo Marinari; Stefano Patarnello; Sauro Succi (IBM J. Res. Dev., 1991)

The APE-100 Computer: (I) the Architecture. - Claudia Battista; Simone Cabasino; Francesco Marzano; Pier Stanislao Paolucci; Jarda Pech; Federico Rapuano; Renata Sarno; Gian Marco Todesco; Mario Torelli; Walter Tross; Piero Vicini; Nicola Cabibbo; et al. (Int. J. High Speed Comput., 1993)

Ianus: An Adaptive FPGA Computer. - Francesco Belletti; Filippo Mantovani; Giorgio Poli; Sebastiano Fabio Schifano; Raffaele Tripiccione; Isabel Campos Plasencia; Andres Cruz Flor; Denis Navarro; Sergio Perez Gaviro; Daniele Sciretti; Alfonso Tarancón; Jose Luis Velasco; et al. (Comput. Sci. Eng., 2006)

IANUS: Scientific Computing on an FPGA-Based Architecture. - Francesco Belletti; Maria Cotallo; Andres Cruz Flor; Luis Antonio Fernandez; Antonio Gordillo; Andrea Maiorano; Filippo Mantovani; Enzo Marinari; Victor Martin-Mayor; Antonio Munoz Sudupe; Denis Navarro; Sergio Perez Gaviro; et al. (PARCO, 2007)

IANUS: an FPGA-based System for High Performance Scientific Computing - Francesco Belletti; Maria Cotallo; Andres Cruz Flor; Luis Antonio Fernandez; Antonio Gordillo; Andrea Maiorano; Filippo Mantovani; Enzo Marinari; Victor Martin-Mayor; Antonio Munoz Sudupe; Denis Navarro; Sergio Perez Gaviro; et al. (CoRR, 2007)

Finding long cycles in graphs - Enzo Marinari; Guilhem Semerjian; Valery Van Kerrebroeck (CoRR, 2007)

Simulating spin systems on IANUS, an FPGA-based computer. - Francesco Belletti; Maria Cotallo; Andres Cruz Flor; Luis Antonio Fernandez; Antonio Gordillo; Andrea Maiorano; Filippo Mantovani; Enzo Marinari; Victor Martin-Mayor; Antonio Munoz Sudupe; Denis Navarro; Sergio Perez Gaviro; et al. (Comput. Phys. Commun., 2008)

Janus: An FPGA-Based System for High-Performance Scientific Computing. - Francesco Belletti; Maria Cotallo; Andres Cruz Flor; Luis Antonio Fernandez; Antonio Gordillo-Guerrero; Marco Guidetti; Andrea Maiorano; Filippo Mantovani; Enzo Marinari; Victor Martin-Mayor; Antonio Munoz Sudupe; Denis Navarro; et al. (Comput. Sci. Eng., 2009)

Spin Glass Simulations on the Janus Architecture: A Desperate Quest for Strong Scaling. - Marco Baity-Jesi; Rachel A. Baños; Andrés Cruz Flor; Luis Antonio Fernández; José Miguel Gil-Narvión; Antonio Gordillo-Guerrero; Marco Guidetti; David Iñiguez; Andrea Maiorano; Filippo Mantovani; Enzo Marinari; Victor Martin-Mayor; et al. (Euro-Par Workshops, 2012)

Janus2: an FPGA-based supercomputer for spin glass simulations. - Marco Baity-Jesi; Rachel A. Baños; Andres Cruz Flor; Luis Antonio Fernández; José Miguel Gil-Narvión; Antonio Gordillo-Guerrero; Marco Guidetti; David Iñiguez; Andrea Maiorano; Filippo Mantovani; Enzo Marinari; Victor Martin-Mayor; et al. (FutureHPC@ICS, 2012)

Reconfigurable computing for Monte Carlo simulations: results and prospects of the Janus project - Marco Baity-Jesi; Rachel A. Baños; Andrés Cruz Flor; Luis Antonio Fernández; José Miguel Gil-Narvión; Antonio Gordillo-Guerrero; Marco Guidetti; David Iñiguez; Andrea Maiorano; Filippo Mantovani; Enzo Marinari; Victor Martin-Mayor; et al. (CoRR, 2012)

A Scalable Algorithm to Explore the Gibbs Energy Landscape of Genome-Scale Metabolic Networks. - Daniele De Martino; Matteo Figliuzzi; Andrea De Martino; Enzo Marinari (PLoS Comput. Biol., 2012)

The Janus Project: Boosting Spin-Glass Simulations Using FPGAs. - Antonio Gordillo-Guerrero; Marco Baity-Jesi; Raquel Alvarez Baños; Andrés Cruz Flor; Luis Antonio Fernández; José Miguel Gil-Narvión; David Iñiguez; Andrea Maiorano; Fabio Mantovani; Enzo Marinari; Victor Martin-Mayor; Jorge Monforte-Garcia; et al. (PDeS, 2013)

Energy metabolism and glutamate-glutamine cycle in the brain: a stoichiometric modeling perspective. - Francesco Alessandro Massucci; Mauro DiNuzzo; Federico Giove; Bruno Maraviglia; Isaac Pérez Castillo; Enzo Marinari; Andrea De Martino (BMC Syst. Biol., 2013)

Cross correlations of the American baby names. - Paolo Barucca; Jacopo Rocchi; Enzo Marinari; Giorgio Parisi; Federico Ricci-Tersenghi (CoRR, 2014)

Janus II: A new generation application-driven computer for spin-system simulations. - Marco Baity-Jesi; Rachel A. Baños; Andrés Cruz Flor; Luis Antonio Fernández; José Miguel Gil-Narvión; Antonio Gordillo-Guerrero; David Iñiguez; Andrea Maiorano; Filippo Mantovani; Enzo Marinari; Victor Martin-Mayor; Jorge Monforte-Garcia; et al. (Comput. Phys. Commun., 2014)

Probing the Limits to MicroRNA-Mediated Control of Gene Expression. - Araks Martirosyan; Matteo Figliuzzi; Enzo Marinari; Andrea De Martino (PLoS Comput. Biol., 2016)

Constrained Allocation Flux Balance Analysis. - Matteo Mori; Terence Hwa; Olivier C. Martin; Andrea De Martino; Enzo Marinari (PLoS Comput. Biol., 2016)

Phase transitions in integer linear problems. - S. Colabrese; Daniele De Martino; Luca Leuzzi; Enzo Marinari (CoRR, 2017)

Forgetting Memories and Their Attractiveness. - Enzo Marinari (Neural Comput., 2019)

Competing endogenous RNA crosstalk at system level. - Mattia Miotto; Enzo Marinari; Andrea De Martino (PLoS Comput. Biol., 2019)

How we are leading a 3-XORSAT challenge: from the energy landscape to the algorithm and its efficient implementation on GPUs. - Massimo Bernaschi; Mauro Bisson; Massimiliano Fatica; Enzo Marinari; Victor Martin-Mayor; Giorgio Parisi; Federico Ricci-Tersenghi (CoRR, 2021)

Eigenvector Dreaming. - Marco Benedetti; Louis Carillo; Enzo Marinari; Marc Mézard (CoRR, 2023)

Microcanonical simulated annealing: Massively parallel Monte Carlo simulations with sporadic random-number generation. - Massimo Bernaschi; Luis Antonio Fernández; Isidoro González-Adalid Pemartín; Enzo Marinari; Victor Martin-Mayor; Giorgio Parisi; Federico Ricci-Tersenghi; Juan Jesus Ruiz-Lorenzo; David Yllanes (CoRR, 2025)