MutaProt: a web interface for structural analysis of point mutations. - Eran Eyal; Rafael Najmanovich; Vladimir Sobolev; Marvin Edelman (Bioinform., 2001)

Importance of solvent accessibility and contact surfaces in modeling side-chain conformations in proteins. - Eran Eyal; Rafael Najmanovich; Brendan J. McConkey; Marvin Edelman; Vladimir Sobolev (J. Comput. Chem., 2004)

Dynamic maintenance of molecular surfaces under conformational changes. - Eran Eyal; Dan Halperin (SCG, 2005)

Improved Maintenance of Molecular Surfaces Using Dynamic Graph Connectivity. - Eran Eyal; Dan Halperin (WABI, 2005)

SPACE: a suite of tools for protein structure prediction and analysis based on complementarity and environment. - Vladimir Sobolev; Eran Eyal; Sergey Gerzon; Vladimir Potapov; Mariana Babor; Jaime Prilusky; Marvin Edelman (Nucleic Acids Res., 2005)

Anisotropic network model: systematic evaluation and a new web interface. - Eran Eyal; Lee-Wei Yang; Ivet Bahar (Bioinform., 2006)

Anisotropic fluctuations of amino acids in protein structures: insights from X-ray crystallography and elastic network models. - Eran Eyal; Chakra Chennubhotla 001; Lee-Wei Yang; Ivet Bahar (ISMB/ECCB (Supplement of Bioinformatics), 2007)

Rapid assessment of correlated amino acids from pair-to-pair (P2P) substitution matrices. - Eran Eyal; Shmuel Pietrokovski; Ivet Bahar (Bioinform., 2007)

Refining intra-protein contact prediction by graph analysis. - Milana Frenkel-Morgenstern; Rachel Magid; Eran Eyal; Shmuel Pietrokovski (BMC Bioinform., 2007)

Analysis of correlated mutations in HIV-1 protease using spectral clustering. - Ying Liu; Eran Eyal; Ivet Bahar (Bioinform., 2008)

Principal component analysis of native ensembles of biomolecular structures (PCA_NEST): insights into functional dynamics. - Lee-Wei Yang; Eran Eyal; Ivet Bahar; Akio Kitao (Bioinform., 2009)

The anisotropic network model web server at 2015 (ANM 2.0). - Eran Eyal; Gengkon Lum; Ivet Bahar (Bioinform., 2015)

e23D: database and visualization of A-to-I RNA editing sites mapped to 3D protein structures. - Oz Solomon; Eran Eyal; Ninette Amariglio; Ron Unger; Gidi Rechavi (Bioinform., 2016)