The Role of Unequal Crossover in Alpha-Satellite DNA Evolution: A Computational Analysis. - Can Alkan; Evan E. Eichler; Jeffrey A. Bailey; Süleyman Cenk Sahinalp; Eray Tüzün (J. Comput. Biol., 2004)

Manipulating multiple sequence alignments via MaM and WebMaM. - Can Alkan; Eray Tüzün; Jerome Buard; Franck Lethiec; Evan E. Eichler; Jeffrey A. Bailey; Süleyman Cenk Sahinalp (Nucleic Acids Res., 2005)

Using continuous integration and automated test techniques for a robust C4ISR system. - H. Mehmet Yüksel; Eray Tüzün; Erdogan Gelirli; Emrah Biyikli; Buyurman Baykal (ISCIS, 2009)

A Data-Centric Framework for Network Enabled C4ISR Software Systems. - Hüseyin N. Karaca; H. Mehmet Yüksel; Eray Tüzün; Ismail Kilinç; Buyurman Baykal (ISCIS, 2010)

Multidimensional Classification Approach for Defining Product Line Engineering Transition Strategies. - Bedir Tekinerdogan; Eray Tüzün; Ediz Saykol (SPLC, 2010)

Exploring the Business Case for Transitioning from a Framework-based Approach to a Software Product Line Engineering Approach. - Bedir Tekinerdogan; Eray Tüzün; Ediz Saykol (SPLC Workshops, 2010)

A case study on applying clone technology to an industrial application framework. - Eray Tüzün; Emre Er (IWSC, 2012)

Decision support for adopting SPLE with Transit-PL. - Mert Emin Kalender; Eray Tüzün; Bedir Tekinerdogan (SPLC Workshops, 2013)

Büyük Ölçekli Bir Organizasyonda Uygulama Yaşam Döngüsü Yönetimi Uygulama Deneyimi. - Yagup Macit; Eray Tüzün; Kürsat Ince; Ahsen Ikbal Aytekin (UYMS, 2014)

A Decision support model for adopting software product line engineering / ; Yazılım ürün hattı mühendisliğine geçiş için bir karar destek modeli. - Eray Tüzün (2014)

Uygulama Yaşam Döngüsü Yönetimi Sistematik Eşleme Çalışması. - Ahsen Ikbal Aytekin; Eray Tüzün; Yagup Macit; Bedir Tekinerdogan (UYMS, 2015)

Uygulama Yaşam Döngüsü Yönetimi Karşılaştırmalı Süreç İncelemesi. - Yagup Macit; Eray Tüzün (UYMS, 2015)

Analyzing impact of experience curve on ROI in the software product line adoption process. - Eray Tüzün; Bedir Tekinerdogan (Inf. Softw. Technol., 2015)

Empirical evaluation of a decision support model for adopting software product line engineering. - Eray Tüzün; Bedir Tekinerdogan; Mert Emin Kalender; Semih Bilgen (Inf. Softw. Technol., 2015)

Systematic approach for mapping software development methods to the essence framework. - Görkem Giray; Eray Tüzün; Bedir Tekinerdogan; Yagup Macit (TOSE@ICSE, 2016)

Uygulama Yasam Dongusu Yonetimi Altyapisi icin GelISlet (DevOps) Deneyimi. - Ahsen Ikbal Aytekin; Yagup Macit; Eray Tüzün (UYMS, 2016)

Turkiye'deki Universitelerdeki Yazilim Muhendisligi Ogretim Programlarinin SWEBOK Kilavuzu Kullanilarak Degerlendirilmesi. - Görkem Giray; Eray Tüzün; Vahid Garousi (UYMS, 2016)

Sanal Ofis Ortaminda Kod Gozden Gecirme ile Kod Degerlendirmesi. - Merve Kaymak; Mehmet Namiduru; Eray Tüzün; Murat Yilmaz 001 (UYMS, 2016)

Examining Reward Mechanisms for Effective Usage of Application Lifecycle Management Tools. - Çagdas Üsfekes; Murat Yilmaz 001; Eray Tüzün; Paul M. Clarke; Rory V. O'Connor (EuroSPI, 2017)

Tarski: a platform for automated analysis of dynamically configurable traceability semantics. - Ferhat Erata; Moharram Challenger; Bedir Tekinerdogan; Anne Monceaux; Eray Tüzün; Geylani Kardas (SAC, 2017)

Essence Surec Modelleme Cercevesi icin Otomasyon Yazilimi Gelistirme Deneyimi(Development Experience in Automation Software for Essence Process Modeling Framework). - Yagup Macit; Çagdas Üsfekes; Ahsen Ikbal Aytekin; Eray Tüzün (UYMS, 2017)

Uygulama Yasam Dongusu Yonetim Araclarinin Verimini Arttirmak Icin Ciddi Oyun Uygulamasi(Examining Reward Mechanisms for Effective Usage of Application Lifecycle Management Tools). - Cagdas Usfekes; Murat Yilmaz 001; Eray Tüzün (UYMS, 2017)

Ise Alistirma (Onboarding) Sureclerinin Iyilestirilmesi icin Dusunulmus Bir Endustriyel Vaka Calismasi(An Industrial Case Study to Improve the Onboarding Process in Software Management). - Murat Yilmaz 001; Ulas Güleç; Rory O'Connor; Paul M. Clarke; Eray Tüzün (UYMS, 2017)

Adopting Augmented Reality for the Purpose of Software Development Process Training and Improvement: An Exploration. - Ipek Ohri; Irem Öge; Bora Orkun; Murat Yilmaz 001; Eray Tüzün; Paul M. Clarke; Rory V. O'Connor (EuroSPI, 2018)

Are computer science and engineering graduates ready for the software industry?: experiences from an industrial student training program. - Eray Tüzün; Hakan Erdogmus; Izzet Gökhan Özbilgin (ICSE (SEET), 2018)

Investigating the Validity of Ground Truth in Code Reviewer Recommendation Studies. - Emre Dogan; Eray Tüzün; K. Ayberk Tecimer; H. Altay Güvenir (ESEM, 2019)

Applying Blockchain to Improve the Integrity of the Software Development Process. - Murat Yilmaz 001; Serdar Tasel; Eray Tüzün; Ulas Güleç; Rory V. O'Connor; Paul M. Clarke (EuroSPI, 2019)

Catching up with method and process practice: an industry-informed baseline for researchers. - Jil Klünder; Regina Hebig; Paolo Tell; Marco Kuhrmann; Joyce Nakatumba-Nabende; Rogardt Heldal; Stephan Krusche; Masud Fazal-Baqaie; Michael Felderer; Marcela Fabiana Genero Bocco; Steffen Küpper; Sherlock A. Licorish; et al. (ICSE (SEIP), 2019)

Towards unified software project monitoring for organizations using hybrid processes and tools. - Eray Tüzün; Çagdas Üsfekes; Yagup Macit; Görkem Giray (ICSSP, 2019)

Reviewer Recommendation using Software Artifact Traceability Graphs. - Emre Sülün; Eray Tüzün; Ugur Dogrusöz (PROMISE, 2019)

Auction-based serious game for bug tracking. - Çagdas Üsfekes; Eray Tüzün; Murat Yilmaz 001; Yagup Macit; Paul M. Clarke (IET Softw., 2019)

Aligning software engineering education with industrial needs: A meta-analysis. - Vahid Garousi; Görkem Giray; Eray Tüzün; Cagatay Catal; Michael Felderer (J. Syst. Softw., 2019)

Adopting integrated application lifecycle management within a large-scale software company: An action research approach. - Eray Tüzün; Bedir Tekinerdogan; Yagup Macit; Kürsat Ince (J. Syst. Softw., 2019)

ToolStackers: A Boardgame for SE Education. - Baris Ardiç; Eray Tüzün (CSEE&T, 2020)

Creation of a Serious Game for Teaching Code Review: An Experience Report. - Baris Ardiç; Irem Yurdakul; Eray Tüzün (CSEE&T, 2020)

Identifying key developers using artifact traceability graphs. - H. Alperen Çetin; Eray Tüzün (PROMISE, 2020)

CRSG: a serious game for teaching code review. - Kaan Ünlü; Baris Ardiç; Eray Tüzün (ESEC/SIGSOFT FSE, 2020)

Methods for Identifying Architectural Debt: A Systematic Mapping Study. - Yagup Macit; Görkem Giray; Eray Tüzün (UYMS, 2020)

Large-Scale Manual Validation of Bug Fixing Commits: A Fine-grained Analysis of Tangling. - Steffen Herbold; Alexander Trautsch; Benjamin Ledel; Alireza Aghamohammadi; Taher Ahmed Ghaleb; Kuljit Kaur Chahal; Tim Bossenmaier; Bhaveet Nagaria; Philip Makedonski; Matin Nili Ahmadabadi; Kristóf Szabados; Helge Spieker; et al. (CoRR, 2020)

Understanding the Knowledge Gaps of Software Engineers: An Empirical Analysis Based on SWEBOK. - Vahid Garousi; Görkem Giray; Eray Tüzün (ACM Trans. Comput. Educ., 2020)

Summary of the 1st ICSSP-ICGSE Joint Event. - Paolo Tell; David Raffo; Liguo Huang; Igor Steinmacher; Ricardo Britto 001; Eray Tüzün; Paul M. Clarke (ACM SIGSOFT Softw. Eng. Notes, 2020)

Closing the Gap Between Software Engineering Education and Industrial Needs. - Vahid Garousi; Görkem Giray; Eray Tüzün; Cagatay Catal; Michael Felderer (IEEE Softw., 2020)

Detection and Elimination of Systematic Labeling Bias in Code Reviewer Recommendation Systems. - K. Ayberk Tecimer; Eray Tüzün; Hamdi Dibeklioglu; Hakan Erdogmus (EASE, 2021)

Towards a Taxonomy of Bug Tracking Process Smells: A Quantitative Analysis. - Khushbakht Ali Qamar; Emre Sülün; Eray Tüzün (SEAA, 2021)

Towards a Taxonomy of Inline Code Comment Smells. - Elgun Jabrayilzade; Olcaytu Gürkan; Eray Tüzün (SCAM, 2021)

Augmenting Code Review Experience Through Visualization. - Faruk Balci; Dilruba Sultan Haliloglu; Onur Sahin; Cankat Tilki; Mehmet Ata Yurtsever; Eray Tüzün (VISSOFT, 2021)

Characterizing Duplicate Bugs: An Empirical Analysis. - Berfin Kucuk; Eray Tuzun (SANER, 2021)

RSTrace+: Reviewer suggestion using software artifact traceability graphs. - Emre Sülün; Eray Tüzün; Ugur Dogrusöz (Inf. Softw. Technol., 2021)

A review of code reviewer recommendation studies: Challenges and future directions. - H. Alperen Çetin; Emre Dogan; Eray Tüzün (Sci. Comput. Program., 2021)

An Interactive Approach to Teaching Git Version Control System. - Elgun Jabrayilzade; Fatih Sevban Uyanik; Emre Sülün; Eray Tüzün (HICSS, 2022)

Teaching Design Patterns Using Interactive Methods. - Mehmet Ata Yurtsever; Eray Tüzün (HICSS, 2022)

Bus Factor in Practice. - Elgun Jabrayilzade; Mikhail Evtikhiev; Eray Tüzün; Vladimir Kovalenko (ICSE (SEIP), 2022)

Bug Tracking Process Smells In Practice. - Erdem Tuna; Vladimir Kovalenko; Eray Tüzün (ICSE (SEIP), 2022)

Assessing the quality of GitHub copilot's code generation. - Burak Yetistiren; Isik Ozsoy; Eray Tuzun (PROMISE, 2022)

Investigating the Impact of Forgetting in Software Development. - Utku Ünal; Eray Tüzün; Tamer Gezici; Ausaf Ahmed Farooqui (CoRR, 2022)

Analyzing developer contributions using artifact traceability graphs. - H. Alperen Çetin; Eray Tüzün (Empir. Softw. Eng., 2022)

A fine-grained data set and analysis of tangling in bug fixing commits. - Steffen Herbold; Alexander Trautsch; Benjamin Ledel; Alireza Aghamohammadi; Taher Ahmed Ghaleb; Kuljit Kaur Chahal; Tim Bossenmaier; Bhaveet Nagaria; Philip Makedonski; Matin Nili Ahmadabadi; Kristóf Szabados; Helge Spieker; et al. (Empir. Softw. Eng., 2022)

Towards a taxonomy of code review smells. - Emre Dogan; Eray Tüzün (Inf. Softw. Technol., 2022)

Taxonomy of bug tracking process smells: Perceptions of practitioners and an empirical analysis. - Khushbakht Ali Qamar; Emre Sülün; Eray Tüzün (Inf. Softw. Technol., 2022)

Cleaning ground truth data in software task assignment. - K. Ayberk Tecimer; Eray Tüzün; Cansu Moran; Hakan Erdogmus (Inf. Softw. Technol., 2022)

Ground-Truth Deficiencies in Software Engineering: When Codifying the Past Can Be Counterproductive. - Eray Tüzün; Hakan Erdogmus; Maria Teresa Baldassarre; Michael Felderer; Robert Feldt; Burak Turhan (IEEE Softw., 2022)

What Makes Agile Software Development Agile? - Marco Kuhrmann; Paolo Tell; Regina Hebig; Jil Klünder; Jürgen Münch; Oliver Linssen; Dietmar Pfahl; Michael Felderer; Christian R. Prause; Stephen G. MacDonell; Joyce Nakatumba-Nabende; David Raffo; et al. (IEEE Trans. Software Eng., 2022)

Analyzing Bug Life Cycles to Derive Practical Insights. - Çagri Eren; Kerem Sahin; Eray Tüzün (EASE, 2023)

Towards Better Code Reviews: Using Mutation Testing to Improve Reviewer Attention. - Ziya Mukhtarov; Mannan Abdul; Mokhlaroyim Raupova; Javid Baghirov; Osama Tanveer; Haluk Altunel; Eray Tüzün (ICSSP, 2023)

Bus Factor Explorer. - Egor Klimov; Muhammad Umair Ahmed; Nikolai Sviridov; Pouria Derakhshanfar; Eray Tüzün; Vladimir Kovalenko (ASE, 2023)

Do Developers Fix Continuous Integration Smells? - Ayberk Yasa; Ege Ergül; Hakan Erdogmus; Eray Tüzün (PROMISE, 2023)

BFSig: Leveraging File Significance in Bus Factor Estimation. - Vahid Haratian; Mikhail Evtikhiev; Pouria Derakhshanfar; Eray Tüzün; Vladimir Kovalenko (ESEC/SIGSOFT FSE, 2023)

Evaluating the Code Quality of AI-Assisted Code Generation Tools: An Empirical Study on GitHub Copilot, Amazon CodeWhisperer, and ChatGPT. - Burak Yetistiren; Isik Özsoy; Miray Ayerdem; Eray Tüzün (CoRR, 2023)

Editorial: Best papers of the 14th International Conference on Software and System Processes (ICSSP 2020) and 15th International Conference on Global Software Engineering (ICGSE 2020). - Igor Steinmacher; Paul M. Clarke; Eray Tuzun; Ricardo Britto 001 (J. Softw. Evol. Process., 2023)

Editorial: Machine learning, software process, and global software engineering. - Igor Steinmacher; Paul M. Clarke; Eray Tuzun; Ricardo Britto 001 (J. Softw. Evol. Process., 2023)

Characterizing duplicate bugs: Perceptions of practitioners and an empirical analysis. - Berfin Kucuk; Idil Hanhan; Eray Tuzun (J. Softw. Evol. Process., 2023)

Towards Unmasking LGTM Smells in Code Reviews: A Comparative Study of Comment-Free and Commented Reviews. - Mahmut Furkan Gön; Burak Yetistiren; Eray Tüzün (ICSME, 2024)

Do code reviews lead to fewer code smells? - Erdem Tuna; Carolyn Seaman; Eray Tüzün (J. Syst. Softw., 2024)

Taxonomy of inline code comment smells. - Elgun Jabrayilzade; Ayda Yurtoglu; Eray Tüzün (Empir. Softw. Eng., 2024)

An Empirical Analysis of Issue Templates Usage in Large-Scale Projects on GitHub. - Emre Sülün; Metehan Saçakçi; Eray Tüzün (ACM Trans. Softw. Eng. Methodol., 2024)

Enhancing Pull Request Reviews: Leveraging Large Language Models to Detect Inconsistencies Between Issues and Pull Requests. - Ali Tunahan Isik; Hatice Kübra Çaglar; Eray Tüzün (Forge@ICSE, 2025)

Automated Code Review in Practice. - Umut Cihan; Vahid Haratian; Arda Içöz; Mert Kaan Gül; Ömercan Devran; Emircan Furkan Bayendur; Baykal Mehmet Uçar; Eray Tüzün (SEIP@ICSE, 2025)

RefExpo: Unveiling Software Project Structures through Advanced Dependency Graph Extraction. - Vahid Haratian; Pouria Derakhshanfar; Vladimir Kovalenko; Eray Tüzün (MSR, 2025)

Uncovering the Challenges: A Study of Corner Cases in Bug-Inducing Commits. - Atakan Serifoglu; Eray Tüzün (SANER, 2025)

Evaluating ReLink for Traceability Link Recovery in Practice. - Ayberk Yasa; Cemhan Kaan Özaltan; Görkem Ayten; Fatih Kaplama; Ömercan Devran; Baykal Mehmet Uçar; Eray Tüzün (SANER, 2025)

SmartDelta Methodology: Automated Quality Assurance and Optimization for Incremental System Engineering. - Benedikt Dornauer; Michael Felderer; Mehrdad Saadatmand; Muhammad Abbas 002; Nicolas Bonnotte; Andreas Dreschinski; Eduard Paul Enoiu; Eray Tüzün; Baykal Mehmet Uçar; Ömercan Devran; Robin Gröpler (CoRR, 2025)

A Serious Game Approach to Introduce the Code Review Practice. - Baris Ardiç; Eray Tüzün (J. Softw. Evol. Process., 2025)

BugCraft: End-to-End Crash Bug Reproduction Using LLM Agents in Minecraft. - Eray Yapagci; Yavuz Alp Sencer Öztürk; Eray Tüzün (CoRR, 2025)

Towards Automated Detection of Inline Code Comment Smells. - Ipek Oztas; U. Boran Torun; Eray Tüzün (CoRR, 2025)

Evaluating the Impact of Data Cleaning on the Quality of Generated Pull Request Descriptions. - Kutay Tire; Berk Çakar; Eray Tüzün (CoRR, 2025)

Evaluating Large Language Models for Code Review. - Umut Cihan; Arda Içöz; Vahid Haratian; Eray Tüzün (CoRR, 2025)

Enhanced code reviews using pull request based change impact analysis. - Ismail Sergen Göçmen; Ahmed Salih Cezayir; Eray Tüzün (Empir. Softw. Eng., 2025)

Process smells in practice: an evaluative case study. - Ugur Can Altun; Ismail Sergen Göçmen; Emre Sülün; Erdem Tuna; Eray Tüzün (Empir. Softw. Eng., 2025)

SAA: A framework for improving the software development process via visualization-based software analytics. - Lara Merdol; Eray Tüzün; Ugur Dogrusoz (J. Syst. Softw., 2026)