Network-guided identification of cancer-selective combinatorial therapies in ovarian cancer. - Liye He; Daria Bulanova; Jaana Oikkonen; Antti Häkkinen; Kaiyang Zhang; Shuyu Zheng; Wenyu Wang; Erdogan Pekcan Erkan; Olli Carpén; Titta Joutsiniemi; Sakari Hietanen; Johanna Hynninen; et al. (Briefings Bioinform., 2021)

PRISM: recovering cell-type-specific expression profiles from individual composite RNA-seq samples. - Antti Häkkinen; Kaiyang Zhang; Amjad Alkodsi; Noora Andersson; Erdogan Pekcan Erkan; Jun Dai; Katja Kaipio; Tarja Lamminen; Naziha Mansuri; Kaisa Huhtinen; Anna Vähärautio; Olli Carpén; et al. (Bioinform., 2021)

miQC: An adaptive probabilistic framework for quality control of single-cell RNA-sequencing data. - Ariel A. Hippen; Matias M. Falco; Lukas M. Weber; Erdogan Pekcan Erkan; Kaiyang Zhang; Jennifer Anne Doherty; Anna Vähärautio; Casey S. Greene; Stephanie C. Hicks (PLoS Comput. Biol., 2021)