RNA Tree Comparisons via Unrooted Unordered Alignments. - Nimrod Milo; Shay Zakov; Erez Katzenelson; Eitan Bachmat; Yefim Dinitz; Michal Ziv-Ukelson (WABI, 2012)

Unrooted unordered homeomorphic subtree alignment of RNA trees. - Nimrod Milo; Shay Zakov; Erez Katzenelson; Eitan Bachmat; Yefim Dinitz; Michal Ziv-Ukelson (Algorithms Mol. Biol., 2013)

Recent Results on Three Problems in Comparative Structural RNAomics. - Shay Zakov; Nimrod Milo; Tamar Pinhas; Sivan Yogev; Erez Katzenelson; Eitan Bachmat; Yefim Dinitz; Dekel Tsur; Michal Ziv-Ukelson (CMSR@ECCB, 2014)