SUMONA: A supervised method for optimizing network alignment. - Erhun Giray Tuncay; Tolga Can (Comput. Biol. Chem., 2016)

Optimizing Global Network Alignment in Protein-Protein Interaction Networks (Optimierung der globalen Netzwerkausrichtung in Protein-Protein-Interaktionsnetzwerken) - Erhun Giray Tuncay (2022)

Semantification of Space Data - A Feasibility Study. - Felix Engel 002; Nenad Krdzavac; Erhun Giray Tuncay; Axel Klinger; John Hughes (JCDL, 2023)

Parallel Exchange of Randomized SubGraphs for Optimization of Network Alignment: PERSONA. - Erhun Giray Tuncay; Riza Cenk Erdur; Tim Conrad 001 (IEEE ACM Trans. Comput. Biol. Bioinform., 2023)

Enhancing WebProtégé with Version Control Systems. - Erhun Giray Tuncay; Nenad Krdzavac; Felix Engel 002 (KGSWC, 2024)