Constructing a meaningful evolutionary average at the phylogenetic center of mass. - Eric A. Stone; Arend Sidow (BMC Bioinform., 2007)

Structural properties of the minimum cut of partially-supplied graphs. - Alexander R. Griffing; Benjamin R. Lynch; Eric A. Stone (Discret. Appl. Math., 2014)

ISG: I can See Your Gene Expression. - Yan Yang 011; Liyuan Pan; Liu Liu 009; Eric A. Stone (BMVC, 2022)

Biomass Prediction with 3D Point Clouds from LiDAR. - Liyuan Pan; Liu Liu 009; Anthony G. Condon; Gonzalo M. Estavillo; Robert A. Coe; Geoff Bull; Eric A. Stone; Lars Petersson; Vivien Rolland (WACV, 2022)

DPST: De Novo Peptide Sequencing with Amino-Acid-Aware Transformers. - Yan Yang 011; Md. Zakir Hossain; Khandaker Asif Ahmed; Liyuan Pan; Shafin Rahman; Eric A. Stone (CoRR, 2022)

Exemplar Guided Deep Neural Network for Spatial Transcriptomics Analysis of Gene Expression Prediction. - Yan Yang 011; Md. Zakir Hossain; Eric A. Stone; Shafin Rahman (WACV, 2023)

MMCBE: Multi-Modality Dataset for Crop Biomass Estimation and Beyond. - Xuesong Li 001; Zeeshan Hayder; Ali Zia; Connor Cassidy; Shiming Liu; Warwick Stiller; Eric A. Stone; Warren Conaty; Lars Petersson; Vivien Rolland (DICTA, 2024)

Spatial Transcriptomics Analysis of Zero-Shot Gene Expression Prediction. - Yan Yang 011; Md. Zakir Hossain; Xuesong Li 001; Shafin Rahman; Eric A. Stone (MICCAI (4), 2024)

Convolutional Masked Image Modeling for Dense Prediction Tasks on Pathology Images. - Yan Yang 011; Liyuan Pan; Liu Liu 009; Eric A. Stone (WACV, 2024)

Topological deep learning: a review of an emerging paradigm. - Ali Zia; Abdelwahed Khamis; James Nichols; Usman Bashir Tayab; Zeeshan Hayder; Vivien Rolland; Eric A. Stone; Lars Petersson (Artif. Intell. Rev., 2024)

NeFF-BioNet: Crop Biomass Prediction from Point Cloud to Drone Imagery. - Xuesong Li 001; Zeeshan Hayder; Ali Zia; Connor Cassidy; Shiming Liu; Warwick Stiller; Eric A. Stone; Warren Conaty; Lars Petersson; Vivien Rolland (CoRR, 2024)

Spatial transcriptomics analysis of gene expression prediction using exemplar guided graph neural network. - Yan Yang 011; Md. Zakir Hossain; Eric A. Stone; Shafin Rahman (Pattern Recognit., 2024)

BioNet and NeFF: Crop Biomass Prediction from Point Clouds to Drone Imagery. - Xuesong Li 001; Zeeshan Hayder; Ali Zia; Connor Cassidy; Shiming Liu; Warwick Stiller; Eric A. Stone; Warren Conaty; Lars Petersson; Vivien Rolland (WACV, 2025)

Flowering Time Prediction of Wheat From DIA-MS Data. - Yan Yang 011; Utpal Bose; James Broadbent; Sally Stockwell; Keren Byrne; Md. Zakir Hossain; Eric A. Stone; Shannon Dillon (WACV, 2025)

A Review on Coarse to Fine-Grained Animal Action Recognition. - Ali Zia; Renuka Sharma; Abdelwahed Khamis; Xuesong Li 001; Muhammad Husnain; Numan Shafi; Saeed Anwar; Sabine Schmoelzl; Eric A. Stone; Lars Petersson; Vivien Rolland (CoRR, 2025)