ToppGene Suite for gene list enrichment analysis and candidate gene prioritization. - Jing Chen 021; Eric E. Bardes; Bruce J. Aronow; Anil G. Jegga (Nucleic Acids Res., 2009)

ToppCluster: a multiple gene list feature analyzer for comparative enrichment clustering and network-based dissection of biological systems. - Vivek Kaimal; Eric E. Bardes; Scott C. Tabar; Anil G. Jegga; Bruce J. Aronow (Nucleic Acids Res., 2010)

ToppMiR: ranking microRNAs and their mRNA targets based on biological functions and context. - Chao Wu; Eric E. Bardes; Anil G. Jegga; Bruce J. Aronow (Nucleic Acids Res., 2014)