A Framework for Simulation Analysis of Delay Tolerant Routing Protocols. - Sathya Narayanan; Eric McDonald; Geoffrey G. Xie (VTC Fall, 2012)

khmer: Working with Big Data in Bioinformatics - Eric McDonald; C. Titus Brown (CoRR, 2013)

The khmer software package: enabling efficient nucleotide sequence analysis. - Michael R. Crusoe; Hussien F. Alameldin; Sherine Awad; Elmar Boucher; Adam Caldwell; Reed Cartwright; Amanda Charbonneau; Bede Constantinides; Greg Edvenson; Scott A. Fay; Jacob Fenton; Thomas Fenzl; et al. (F1000Research, 2015)