EVALLER: a web server for in silico assessment of potential protein allergenicity. - Alvaro Martinez Barrio; Daniel Soeria-Atmadja; Anders Nistér; Mats G. Gustafsson; Ulf Hammerling; Erik Bongcam-Rudloff (Nucleic Acids Res., 2007)

"Biobanks, biomolecular resources and bioinformatics for health care and medical research in Europe". - Erik Bongcam-Rudloff (BIBE, 2008)

Annotation and visualization of endogenous retroviral sequences using the Distributed Annotation System (DAS) and eBioX. - Alvaro Martinez Barrio; Erik Lagercrantz; Göran O. Sperber; Jonas Blomberg; Erik Bongcam-Rudloff (BMC Bioinform., 2009)

The 20th anniversary of EMBnet: 20 years of bioinformatics for the Life Sciences community. - Domenica D'Elia; Andreas Gisel; Nils-Einar Eriksson; Sophia Kossida; Kimmo Mattila; Lubos Klucar; Erik Bongcam-Rudloff (BMC Bioinform., 2009)

Finding and sharing: new approaches to registries of databases and services for the biomedical sciences. - Damian Smedley; Paul N. Schofield; Chao-Kung Chen; Vassilis Aidinis; Crysanthi Ainali; Jonathan B. L. Bard; Rudi Balling; Ewan Birney; Andrew Blake 003; Erik Bongcam-Rudloff; Anthony J. Brookes; Gianni Cesareni; et al. (Database J. Biol. Databases Curation, 2010)

The EMBRACE web service collection. - Steve Pettifer; Jon C. Ison; Matús Kalas; Dave Thorne; Philip McDermott; Inge Jonassen; Ali Liaquat; José María Fernández 001; José Manuel Rodriguez; David G. Pisano; Christophe Blanchet; Mahmut Uludag; et al. (Nucleic Acids Res., 2010)

Best practices in bioinformatics training for life scientists. - Allegra Via; Thomas Blicher; Erik Bongcam-Rudloff; Michelle D. Brazas; Catherine Brooksbank; Aidan Budd; Javier De Las Rivas; Jacqueline Dreyer; Pedro L. Fernandes; Celia W. G. van Gelder; Joachim Jacob; Rafael C. Jiménez; et al. (Briefings Bioinform., 2013)

Integrated Bio-Search: challenges and trends for the integration, search and comprehensive processing of biological information. - Marco Masseroli; Barend Mons; Erik Bongcam-Rudloff; Stefano Ceri; Alexander E. Kel; François Rechenmann; Frédérique Lisacek; Paolo Romano 001 (BMC Bioinform., 2014)

Data integration in the era of omics: current and future challenges. - David Gomez-Cabrero; Imad Abugessaisa; Dieter Maier; Andrew E. Teschendorff; Matthias Merkenschlager; Andreas Gisel; Esteban Ballestar; Erik Bongcam-Rudloff; Ana Conesa; Jesper Tegnér (BMC Syst. Biol., 2014)

The GOBLET training portal: a global repository of bioinformatics training materials, courses and trainers. - Manuel Corpas; Rafael C. Jiménez; Erik Bongcam-Rudloff; Aidan Budd; Michelle D. Brazas; Pedro L. Fernandes; Bruno A. Gaëta; Celia W. G. van Gelder; Eija Korpelainen; Fran Lewitter; Annette McGrath; Daniel MacLean; et al. (Bioinform., 2015)

GOBLET: The Global Organisation for Bioinformatics Learning, Education and Training. - Teresa K. Attwood; Erik Bongcam-Rudloff; Michelle D. Brazas; Manuel Corpas; Pascale Gaudet; Fran Lewitter; Nicola J. Mulder; Patricia M. Palagi; Maria Victoria Schneider; Celia W. G. van Gelder (PLoS Comput. Biol., 2015)

The eBioKit, a stand-alone educational platform for bioinformatics. - Rafael Hernández-de-Diego; Etienne Pierre de Villiers; Tomas Klingström; Hadrien Gourlé; Ana Conesa; Erik Bongcam-Rudloff (PLoS Comput. Biol., 2017)

Standardization and Quality Assurance in Life-Science Research - Crucially Needed or Unnecessary and Annoying Regulation? - Susanne Hollmann; Teresa K. Attwood; Erik Bongcam-Rudloff; Deborah Duca; Domenica D'Elia; Christoph Endrullat; Marcus Frohme; Katrin Messerschmidt; Babette Regierer (ICT Innovations, 2018)

Simulating Illumina metagenomic data with InSilicoSeq. - Hadrien Gourlé; Oskar Karlsson-Lindsjö; Juliette Hayer; Erik Bongcam-Rudloff (Bioinform., 2019)

The need for standardisation in life science research - an approach to excellence and trust. - Susanne Hollmann; Andreas Kremer; Spela Baebler; Christophe Trefois; Kristina Gruden; Witold R. Rudnicki; Weida Tong; Aleksandra Gruca; Erik Bongcam-Rudloff; Chris T. A. Evelo; Alina S. Nechyporenko; Marcus Frohme; et al. (F1000Research, 2020)

Metagenomics workflow for hybrid assembly, differential coverage binning, metatranscriptomics and pathway analysis (MUFFIN). - Renaud Van Damme; Martin Hölzer; Adrian Viehweger; Bettina Müller; Erik Bongcam-Rudloff; Christian Brandt (PLoS Comput. Biol., 2021)