Microarray data mining: A novel optimization-based approach to uncover biologically coherent structures. - Meng Piao Tan; Erin N. Smith; James R. Broach; Christodoulos A. Floudas (BMC Bioinform., 2008)

Effective filtering strategies to improve data quality from population-based whole exome sequencing studies. - Andrew R. Carson; Erin N. Smith; Hiroko Matsui; Sigrid K. Brækkan; Kristen Jepsen; John-Bjarne Hansen; Kelly A. Frazer (BMC Bioinform., 2014)

Membrane segmentation via active learning with deep networks. - Utkarsh Gaur; Matthew Kourakis; Erin Newman-Smith; William Smith 001; B. S. Manjunath (ICIP, 2016)

CellECT: cell evolution capturing tool. - Diana L. Delibaltov; Utkarsh Gaur; Jennifer Kim; Matthew Kourakis; Erin Newman-Smith; William Smith 001; Samuel A. Belteton; Daniel Szymanski; B. S. Manjunath (BMC Bioinform., 2016)

Pgltools: a genomic arithmetic tool suite for manipulation of Hi-C peak and other chromatin interaction data. - William W. Greenwald; He Li; Erin N. Smith; Paola Benaglio; Naoki Nariai; Kelly A. Frazer (BMC Bioinform., 2017)