Community Science Exemplars in SEAGrid Science Gateway: Apache Airavata Based Implementation of Advanced Infrastructure. - Sudhakar Pamidighantam; Supun Nakandala; Eroma Abeysinghe; Chathuri Wimalasena; Shameera Rathnayaka; Suresh Marru; Marlon E. Pierce (ICCS, 2016)

Anatomy of the SEAGrid Science Gateway. - Supun Nakandala; Sudhakar Pamidighantam; Shameera Yodage; Nipurn Doshi; Eroma Abeysinghe; Chathuri Peli Kankanamalage; Suresh Marru; Marlon E. Pierce (XSEDE, 2016)

The PHASTA Science Gateway: Web-based Execution of Adaptive Computational Fluid Dynamics Simulations. - Cameron W. Smith; Eroma Abeysinghe (PEARC, 2017)

The CSBG - LSU Gateway: Web based Hosted Gateway for Computational System Biology Application Tools from Louisiana State University. - Eroma Abeysinghe; Michal Brylinski; Marcus Christie; Suresh Marru; Marlon E. Pierce (PEARC, 2018)

Searching the Sequence Read Archive using Jetstream and Wrangler. - Kyle Levi; Mats Rynge; Eroma Abeysinghe; Robert A. Edwards (PEARC, 2018)

Science Gateway Implementation at the University of South Dakota: Applications in Research and Education. - Joseph D. Madison; Eroma Abeysinghe; Sudhakar Pamidighantam; Suresh Marru; Marcus Christie; Douglas M. Jennewein; Marlon E. Pierce (PEARC, 2018)

Supporting Science Gateways Using Apache Airavata and SciGaP Services. - Marlon E. Pierce; Suresh Marru; Eroma Abeysinghe; Sudhakar Pamidighantam; Marcus Christie; Dimuthu Wannipurage (PEARC, 2018)

PHASTA Science Gateway for High Performance Computational Fluid Dynamics. - Cameron W. Smith; Eroma Abeysinghe; Suresh Marru; Kenneth E. Jansen (PEARC, 2018)

Simplifying Access to Campus Resources at Southern Illinois University with a Science Gateway. - Sai Susheel Sunkara; Chet Langin; Marlon E. Pierce; Eroma Abeysinghe; Sudhakar Pamidighantam; Suresh Marru (PEARC, 2018)

Building a Science Gateway For Processing and Modeling Sequencing Data Via Apache Airavata. - Zhong Wang 001; Marcus A. Christie; Eroma Abeysinghe; Tinyi Chu; Suresh Marru; Marlon E. Pierce; Charles G. Danko (PEARC, 2018)

A New Science Gateway to Provide Decision Support on Carbon Capture and Storage Technologies. - Yinzhi Wang; Sudhakar Pamidighantam; Sean Yaw; Eroma Abeysinghe; Suresh Marru; Marcus Christie; Kevin M. Ellett; Marlon E. Pierce; Richard S. Middleton (PEARC, 2018)

Using a Science Gateway to Deliver SimVascular Software as a Service for Classroom Instruction. - Nathan M. Wilson; Suresh Marru; Eroma Abeysinghe; Marcus A. Christie; Gabriel D. Maher; Adam R. Updegrove; Marlon E. Pierce; Alison L. Marsden (PEARC, 2018)

LSU Computational System Biology Gateway for Education. - Eroma Abeysinghe; Michal Brylinski; Marcus Christie; Suresh Marru; Marlon E. Pierce (PEARC, 2019)

InterACTWEL Science Gateway for Adaptation Planning in Food-Energy-Water Sectors of Local Communities. - Meghna Babbar-Sebens; Samuel J. Rivera; Eroma Abeysinghe; Suresh Marru; Marlon E. Pierce; Eric Coulter; Majid Farahani; Dimuthu Wannipurage; Marcus Christie (PEARC, 2019)

The USD Science Gateway: A Bridge Between Research and Advanced Computing. - Adison A. Kleinsasser; Sudhakar Pamidighantam; Douglas M. Jennewein; Joseph D. Madison; Marcus Christie; Eroma Abeysinghe; Suresh Marru; Marlon E. Pierce (PEARC, 2019)

Experiences from scaling scale Science Gateway operations. - Suresh Marru; Marlon E. Pierce; Eroma Abeysinghe; Sudhakar Pamidighantam; Marcus Christie; Dimuthu Wannipurage (PEARC, 2019)

The Distant Reader: Tool for Reading. - Eric Lease Morgan; Eroma Abeysinghe; Sudhakar Pamidighantam; Eric Coulter; Suresh Marru; Marlon E. Pierce (PEARC, 2019)

Implementing a Flexible, Fault Tolerant Job Management System for Science Gateways. - Dimuthu Wannipurage; Suresh Marru; Marlon E. Pierce; Eroma Abeysinghe; Sudhakar Pamidighantam; Marcus Christie; Gourav Shenoy; Ajinkya Dhamnaskar; Lahiru Jayathilaka (PEARC, 2019)

TopPIC Gateway: A Web Gateway for Top-Down Mass Spectrometry Data Interpretation. - In Kwon Choi; Eroma Abeysinghe; Eric Coulter; Suresh Marru; Marlon E. Pierce; Xiaowen Liu (PEARC, 2020)

An extensible Django-based web portal for Apache Airavata. - Marcus Christie; Suresh Marru; Eroma Abeysinghe; Dimuthu Upeksha; Sudhakar Pamidighantam; Stephen Paul Adithela; Eldho Mathulla; Aarushi Bisht; Shivam Rastogi; Marlon E. Pierce (PEARC, 2020)

FutureWater Indiana: A science gateway for spatio-temporal modeling of water in Wabash basin with a focus on climate change. - Jennifer R. Dierauer; Chen Zhu; Lei Gong; Alan Walsh; Sudhakar Pamidighantam; Jun Wang 139; Marcus Christie; Eroma Abeysinghe (PEARC, 2020)

Online Single-cell RNA-seq Data Denoising with Transfer Learning. - Bowei Kang; Eroma Abeysinghe; Divyansh Agarwal; Quanli Wang; Sudhakar Pamidighantam; Mo Huang; Nancy Ruonan Zhang; Jingshu Wang (PEARC, 2020)

A Science Gateway for Simulating the Economics of Carbon Sequestration Technologies: SimCCS2.0. - Sudhakar Pamidighantam; Jun Wang 139; Marcus Christie; Eroma Abeysinghe; Kevin M. Ellett; Ryan Kammer; Sean Yaw; Richard S. Middleton; Brendan A. Hoover (PEARC, 2020)

Managing authentication and authorization in distributed science gateway middleware. - Marcus A. Christie; Anuj Bhandar; Supun Nakandala; Suresh Marru; Eroma Abeysinghe; Sudhakar Pamidighantam; Marlon E. Pierce (Future Gener. Comput. Syst., 2020)

User-Centric Design and Evolvable Architecture for Science Gateways: A Case Study. - Suresh Marru; Tanya Kuruvilla; Eroma Abeysinghe; Donald F. McMullen; Marlon E. Pierce; David Gene Morgan; Steven L. Tait; Roger W. Innes (CCGRID, 2021)

A Multi-Protocol, Secure, and Dynamic Data Storage Integration Frameworkfor Multi-tenanted Science Gateway Middleware. - Dimuthu Wannipurage; Isuru Ranawaka; Eroma Abeysinghe; Marcus Christie; Suresh Marru; Marlon E. Pierce (CoRR, 2021)

Building the RNAMake Gateway on PATh: a Student-Led Design Project. - Dinuka De Silva; Derek Weitzel; Joseph Yesselman; Marcus Christie; Robert Quick; Eroma Abeysinghe; Marlon E. Pierce (PEARC, 2022)

SimVascular Gateway for Education and Research. - Justin Tran; Eroma Abeysinghe; John F. LaDisa Jr.; Alison L. Marsden; Marlon E. Pierce (PEARC, 2022)

Experiences with managing data parallel computational workflows for High-throughput Fragment Molecular Orbital (FMO) Calculations. - Dimuthu Wannipurage; Indrajit Deb; Eroma Abeysinghe; Sudhakar Pamidighantam; Suresh Marru; Marlon E. Pierce; Aaron T. Frank (CoRR, 2022)

Defining a Cyberinfrastructure for Plasma Science and Space Weather Simulations. - Eroma Abeysinghe; Cameron W. Smith; Liang Wang 025; James Juno; Matthew Mccall; Marlon E. Pierce; Mark S. Shephard (PEARC, 2023)

Cybershuttle: An End-to-End Cyberinfrastructure Continuum to Accelerate Discovery in Science and Engineering. - Suresh Marru; Marlon E. Pierce; Beth Plale; Sudhakar Pamidighantam; Dimuthu Wannipurage; Marcus Christie; Isuru Ranawaka; Eroma Abeysinghe; Rob Quick; Emad Tajkhorshid; Seid Koric; Jim Basney; et al. (PEARC, 2023)

Airavata Metascheduler: A Reliable, Fault Tolerant, and Resource-Aware Job Scheduling Service. - Isuru Ranawaka; Eroma Abeysinghe; Dimuthu Wannipurage; Dinuka De Silva; Emre H. Brookes; Suresh Marru; Marcus Christie; Sudhakar Pamidighantam; Marlon E. Pierce (PEARC, 2023)

Enhancing Research Productivity: Seamless Integration of Personal Devices and HPC Resources with the Cybershuttle Notebook Gateway. - Yasith Jayawardana; Dimuthu Wannipurage; Eroma Abeysinghe; Suresh Marru (PEARC, 2024)

Python/NEURON code for simulating biophysically realistic thalamocortical dynamics during sleep. - Christian G. Fink; Pavel Sanda; Logan Bayer; Eroma Abeysinghe; Maxim Bazhenov; Giri P. Krishnan (Softw. Impacts, 2024)