An Evolutionary Model-Based Algorithm for Accurate Phylogenetic Breakpoint Mapping and Subtype Prediction in HIV-1. - Sergei L. Kosakovsky Pond; David Posada; Eric W. Stawiski; Colombe Chappey; Art F. Y. Poon; Gareth Hughes; Esther Fearnhill; Mike B. Gravenor; Andrew J. Leigh Brown; Simon D. W. Frost (PLoS Comput. Biol., 2009)

Automated analysis of phylogenetic clusters. - Manon Ragonnet-Cronin; Emma B. Hodcroft; Stéphane Hué; Esther Fearnhill; Valerie Delpech; Andrew J. Leigh Brown; Samantha Lycett (BMC Bioinform., 2013)