Reconstructing Phylogenetic Networks via Cherry Picking and Machine Learning. - Giulia Bernardini 001; Leo van Iersel; Esther Julien; Leen Stougie (WABI, 2022)

Machine Learning for K-adaptability in Two-stage Robust Optimization. - Esther Julien; Krzysztof Postek; S. Ilker Birbil (CoRR, 2022)

Making a Network Orchard by Adding Leaves. - Leo van Iersel; Mark Jones 001; Esther Julien; Yukihiro Murakami (WABI, 2023)

Constructing phylogenetic networks via cherry picking and machine learning. - Giulia Bernardini 001; Leo van Iersel; Esther Julien; Leen Stougie (Algorithms Mol. Biol., 2023)

Neur2RO: Neural Two-Stage Robust Optimization. - Justin Dumouchelle; Esther Julien; Jannis Kurtz; Elias Boutros Khalil (ICLR, 2024)

Neur2BiLO: Neural Bilevel Optimization. - Justin Dumouchelle; Esther Julien; Jannis Kurtz; Elias B. Khalil (NeurIPS, 2024)

Solving the Tree Containment Problem Using Graph Neural Networks. - Arkadiy Dushatskiy; Esther Julien; Leen Stougie; Leo van Iersel (Trans. Mach. Learn. Res., 2024)

Machine Learning for K-Adaptability in Two-Stage Robust Optimization. - Esther Julien; Krzysztof Postek; S. Ilker Birbil (INFORMS J. Comput., 2025)