MEANS: python package for Moment Expansion Approximation, iNference and Simulation. - Sisi Fan; Quentin Geissmann; Eszter Lakatos; Saulius Lukauskas; Angelique Ale; Ann C. Babtie; Paul D. W. Kirk; Michael P. H. Stumpf (Bioinform., 2016)

Transition state characteristics during cell differentiation. - Rowan D. Brackston; Eszter Lakatos; Michael P. H. Stumpf (PLoS Comput. Biol., 2018)

NeoPredPipe: high-throughput neoantigen prediction and recognition potential pipeline. - Ryan O. Schenck; Eszter Lakatos; Chandler Gatenbee; Trevor A. Graham; Alexander R. A. Anderson (BMC Bioinform., 2019)