Gene length and codon usage bias in Drosophila melanogaster, Saccharomyces cerevisiae and Escherichia coli. - Etsuko N. Moriyama; Jeffrey R. Powell (Nucleic Acids Res., 1998)

Identification of novel multi-transmembrane proteins from genomic databases using quasi-periodic structural properties. - Junhyong Kim; Etsuko N. Moriyama; Coral G. Warr; Peter J. Clyne; John R. Carlson (Bioinform., 2000)

Vector NTI, a balanced all-in-one sequence analysis suite. - Guoqing Lu; Etsuko N. Moriyama (Briefings Bioinform., 2004)

GenomeBlast: A Web Tool for Small Genome Comparison. - Guoqing Lu; Liying Jiang; Resa M. Kotalik; Thaine W. Rowley; Luwen Zhang; Xianfeng Chen; Etsuko N. Moriyama (IMSCCS (1), 2006)

GenomeBlast: a web tool for small genome comparison. - Guoqing Lu; Liying Jiang; Resa M. K. Helikar; Thaine W. Rowley; Luwen Zhang; Xianfeng Chen; Etsuko N. Moriyama (BMC Bioinform., 2006)

Mining the Arabidopsis and rice genomes for cyclophilin protein families. - Stephen O. Opiyo; Etsuko N. Moriyama (Int. J. Bioinform. Res. Appl., 2009)

Mining Cytochrome b561 proteins from plant genomes. - Stephen O. Opiyo; Etsuko N. Moriyama (Int. J. Bioinform. Res. Appl., 2010)

SuiteMSA: Visual Tools for Multiple Sequence Alignment Comparison and Molecular Sequence Simulation. - Catherine L. Anderson; Cory L. Strope; Etsuko N. Moriyama (BMC Bioinform., 2011)

Comparative studies of differential gene calling using RNA-Seq data. - Ximeng Zheng; Etsuko N. Moriyama (BMC Bioinform., 2013)

Performance comparison and an ensemble approach of transcriptome assembly. - Sairam Behera; Adam Voshall; Jitender S. Deogun; Etsuko N. Moriyama (BIBM, 2017)

Comparative analysis of alignment tools for nanopore reads. - Natasha Pavlovikj; Etsuko N. Moriyama; Jitender S. Deogun (BIBM, 2017)

MOCASSIN-prot: a multi-objective clustering approach for protein similarity networks. - Brittney N. Keel; Bo Deng; Etsuko N. Moriyama (Bioinform., 2018)

MinIsoClust: Isoform clustering using minhash and locality sensitive hashing. - Sairam Behera; Jitender S. Deogun; Etsuko N. Moriyama (BCB, 2020)

RGPDB: database of root-associated genes and promoters in maize, soybean, and sorghum. - Gleb Moisseyev; Kiyoul Park; Alix Cui; Daniel Freitas; Divith Rajagopal; Anji Reddy Konda; Madalayne Martin-Olenski; Mackenzie Mcham; Kan Liu; Qian Du 003; James C. Schnable; Etsuko N. Moriyama; et al. (Database J. Biol. Databases Curation, 2020)

A consensus-based ensemble approach to improve transcriptome assembly. - Adam Voshall; Sairam Behera; Xiangjun Li; Xiao-Hong Yu; Kushagra Kapil; Jitender S. Deogun; John Shanklin; Edgar B. Cahoon; Etsuko N. Moriyama (BMC Bioinform., 2021)