On the limits of computational functional genomics for bacterial lifestyle prediction. - Eudes Barbosa; Richard Röttger; Anne-Christin Hauschild; Vasco Ariston de Carvalho Azevedo; Jan Baumbach (GCB, 2014)

KeyPathwayMiner 4.0: condition-specific pathway analysis by combining multiple omics studies and networks with Cytoscape. - Nicolas Alcaraz; Josch Pauling; Richa Batra; Eudes Barbosa; Alexander Junge; Anne Christensen; Vasco Ariston de Carvalho Azevedo; Henrik J. Ditzel; Jan Baumbach (BMC Syst. Biol., 2014)

LifeStyle-Specific-Islands (LiSSI): Integrated Bioinformatics Platform for Genomic Island Analysis. - Eudes Barbosa; Richard Röttger; Anne-Christin Hauschild; Siomar de Castro Soares; Sebastian Böcker; Vasco Ariston de Carvalho Azevedo; Jan Baumbach (J. Integr. Bioinform., 2017)