XENet: Using a new graph convolution to accelerate the timeline for protein design on quantum computers. - Jack B. Maguire; Daniele Grattarola; Vikram Khipple Mulligan; Eugene Klyshko; Hans Melo (PLoS Comput. Biol., 2021)

petiteFinder: an automated computer vision tool to compute Petite colony frequencies in baker's yeast. - Christopher J. Nunn; Eugene Klyshko; Sidhartha Goyal (BMC Bioinform., 2023)