Efficient Software Packet Processing on Heterogeneous and Asymmetric Hardware Architectures. - Eva Papadogiannaki; Lazaros Koromilas; Giorgos Vasiliadis; Sotiris Ioannidis (IEEE/ACM Trans. Netw., 2017)

OTTer: A Scalable High-Resolution Encrypted Traffic Identification Engine. - Eva Papadogiannaki; Constantinos Halevidis; Periklis Akritidis; Lazaros Koromilas (RAID, 2018)

CyberSure: A Framework for Liability Based Trust. - George Christou; Eva Papadogiannaki; Michalis Diamantaris; Livia Torterolo; Panos Chatziadam (IOSec/MSTEC/FINSEC@ESORICS, 2019)

Head(er)Hunter: Fast Intrusion Detection using Packet Metadata Signatures. - Eva Papadogiannaki; Dimitris Deyannis; Sotiris Ioannidis (CAMAD, 2020)

TrustAV: Practical and Privacy Preserving Malware Analysis in the Cloud. - Dimitris Deyannis; Eva Papadogiannaki; Giorgos Kalivianakis; Giorgos Vasiliadis; Sotiris Ioannidis (CODASPY, 2020)

Pythia: Scheduling of Concurrent Network Packet Processing Applications on Heterogeneous Devices. - Giannis Giakoumakis; Eva Papadogiannaki; Giorgos Vasiliadis; Sotiris Ioannidis (NetSoft, 2020)

Acceleration of Intrusion Detection in Encrypted Network Traffic Using Heterogeneous Hardware. - Eva Papadogiannaki; Sotiris Ioannidis (Sensors, 2021)

Network Intrusion Detection in Encrypted Traffic. - Eva Papadogiannaki; Giorgos Tsirantonakis; Sotiris Ioannidis (DSC, 2022)

Scheduling of multiple network packet processing applications using Pythia. - Giannis Giakoumakis; Eva Papadogiannaki; Giorgos Vasiliadis; Sotiris Ioannidis (Comput. Networks, 2022)

A Survey on Encrypted Network Traffic Analysis Applications, Techniques, and Countermeasures. - Eva Papadogiannaki; Sotiris Ioannidis (ACM Comput. Surv., 2022)

Pump Up the JARM: Studying the Evolution of Botnets Using Active TLS Fingerprinting. - Eva Papadogiannaki; Sotiris Ioannidis (ISCC, 2023)

Fingerprinting the Shadows: Unmasking Malicious Servers with Machine Learning-Powered TLS Analysis. - Andreas Theofanous; Eva Papadogiannaki; Alexander Shevtsov; Sotiris Ioannidis (WWW, 2024)

Dataset of paper "Fingerprinting the Shadows: Unmasking Malicious Servers with Machine Learning-Powered TLS Analysis" (WWW '24). - Andreas Theofanous; Eva Papadogiannaki; Alexander Shevtsov; Sotiris Ioannidis (Zenodo, 2024)

PCIe Monitoring for Secure Code Execution in Heterogeneous System Architectures. - Iasonas Georgakas; Eva Papadogiannaki; Konstantinos Georgopoulos; Sotiris Ioannidis (CSR, 2025)