N-terminal sequence-based prediction of subcellular location. - Evangelia Petsalakis; Pantelis G. Bagos; Zoi I. Litou; Stavros J. Hamodrakas (BMC Bioinform., 2005)

PredSL: A Tool for the N-terminal Sequence-based Prediction of Protein Subcellular Localization. - Evangelia Petsalaki; Pantelis G. Bagos; Zoi I. Litou; Stavros J. Hamodrakas (Genom. Proteom. Bioinform., 2006)

SuperTarget and Matador: resources for exploring drug-target relationships. - Stefan Günther; Michael Kuhn 004; Mathias Dunkel; Monica Campillos; Christian Senger; Evangelia Petsalaki; Jessica Ahmed; Eduardo Garcia Urdiales; Andreas Gewiess; Lars Juhl Jensen; Reinhard Schneider 002; Roman Skoblo; et al. (Nucleic Acids Res., 2008)

Accurate Prediction of Peptide Binding Sites on Protein Surfaces. - Evangelia Petsalaki; Alexander Stark 001; Eduardo Garcia Urdiales; Robert B. Russell (PLoS Comput. Biol., 2009)

The identification of short linear motif-mediated interfaces within the human interactome. - Robert J. Weatheritt; Katja Luck; Evangelia Petsalaki; Norman E. Davey; Toby J. Gibson (Bioinform., 2012)

PepSite: prediction of peptide-binding sites from protein surfaces. - Leonardo G. Trabuco; Stefano Lise; Evangelia Petsalaki; Robert B. Russell (Nucleic Acids Res., 2012)

SELPHI: correlation-based identification of kinase-associated networks from global phospho-proteomics data sets. - Evangelia Petsalaki; Andreas O. Helbig; Anjali Gopal; Adrian Pasculescu; Frederick P. Roth; Tony Pawson (Nucleic Acids Res., 2015)

Protein Domain-Level Landscape of Cancer-Type-Specific Somatic Mutations. - Fan Yang; Evangelia Petsalaki; Thomas Rolland; David E. Hill; Marc Vidal; Frederick P. Roth (PLoS Comput. Biol., 2015)

Systematic identification of phosphorylation-mediated protein interaction switches. - Matthew J. Betts; Oliver Wichmann; Mathias Utz; Timon Andre; Evangelia Petsalaki; Pablo Minguez; Luca Parca; Frederick P. Roth; Anne-Claude Gavin; Peer Bork; Robert B. Russell (PLoS Comput. Biol., 2017)

Proteomics and phosphoproteomics in precision medicine: applications and challenges. - Girolamo Giudice; Evangelia Petsalaki (Briefings Bioinform., 2019)