Analysis of Conserved Hydrophobic Cores in Proteins and Supramolecular Complexes. - Anna S. Karyagina; Anna S. Ershova; Mikhail Titov; Ivan Olovnikov; Evgeniy Aksianov; Alexandra Ryazanova; Elena Kubareva; Sergei A. Spirin; Andrei Alexeevski (J. Bioinform. Comput. Biol., 2006)

Conserved water molecules in X-Ray Structures Highlight the Role of water in intramolecular and intermolecular Interactions. - Evgeniy Aksianov; Olga Zanegina; Alexander Grishin; Sergei A. Spirin; Anna S. Karyagina; Andrei Alexeevski (J. Bioinform. Comput. Biol., 2008)

Sheep: a Tool for Description of β-Sheets in protein 3D Structures. - Evgeniy Aksianov; Andrei Alexeevski (J. Bioinform. Comput. Biol., 2012)

NPIDB: nucleic acid - protein interaction database. - Dmitry D. Kirsanov; Olga Zanegina; Evgeniy Aksianov; Sergei A. Spirin; Anna S. Karyagina; Andrei Alexeevski (Nucleic Acids Res., 2013)

Conserved features of complexes of TATA-box binding proteins with DNA. - Olga Zanegina; Evgeniy Aksianov; Andrei V. Alexeevski; Anna S. Karyagina; Sergei A. Spirin (J. Bioinform. Comput. Biol., 2016)