The Multilayer Connectome of Caenorhabditis elegans. - Barry Bentley; Robyn Branicky; Christopher L. Barnes; Yee Lian Chew; Eviatar Yemini; Edward T. Bullmore; Petra E. Vértes; William R. Schafer (PLoS Comput. Biol., 2016)

Sinkhorn Permutation Variational Marginal Inference. - Gonzalo E. Mena; Erdem Varol; Amin Nejatbakhsh; Eviatar Yemini; Liam Paninski (AABI, 2019)

Probabilistic Joint Segmentation and Labeling of C. elegans Neurons. - Amin Nejatbakhsh; Erdem Varol; Eviatar Yemini; Oliver Hobert; Liam Paninski (MICCAI (5), 2020)

Demixing Calcium Imaging Data in C. elegans via Deformable Non-negative Matrix Factorization. - Amin Nejatbakhsh; Erdem Varol; Eviatar Yemini; Vivek Venkatachalam; Albert Lin; Aravinthan D. T. Samuel; Oliver Hobert; Liam Paninski (MICCAI (5), 2020)

Statistical Atlas of C. elegans Neurons. - Erdem Varol; Amin Nejatbakhsh; Ruoxi Sun 006; Gonzalo E. Mena; Eviatar Yemini; Oliver Hobert; Liam Paninski (MICCAI (5), 2020)

Toward a more accurate 3D atlas of C. elegans neurons. - Michael Skuhersky; Tailin Wu; Eviatar Yemini; Amin Nejatbakhsh; Edward S. Boyden; Max Tegmark (BMC Bioinform., 2022)

Learning Probabilistic Piecewise Rigid Atlases of Model Organisms via Generative Deep Networks. - Amin Nejatbakhsh; Neel Dey; Vivek Venkatachalam; Eviatar Yemini; Liam Paninski; Erdem Varol (IPMI, 2023)

Learning dynamic representations of the functional connectome in neurobiological networks. - Luciano Dyballa; Samuel Lang; Alexandra Haslund-Gourley; Eviatar Yemini; Steven W. Zucker (ICLR, 2024)