2dSpAn: semiautomated 2-d segmentation, classification and analysis of hippocampal dendritic spine plasticity. - Subhadip Basu; Dariusz Plewczynski; Satadal Saha; Matylda Roszkowska; Marta Magnowska; Ewa Baczynska; Jakub Wlodarczyk (Bioinform., 2016)

Segmentation and assessment of structural plasticity of hippocampal dendritic spines from 3D confocal light microscopy. - Subhadip Basu; Punam Kumar Saha; Ewa Baczynska; Matylda Roszkowska; Marta Magnowska; Nirmal Das; Indranil Guha; Jakub Wlodarczyk (Biomedical Applications in Molecular, Structural, and Functional Imaging, 2018)

3dSpAn: An interactive software for 3D segmentation and analysis of dendritic spines. - Nirmal Das; Ewa Baczynska; Monika Bijata; Blazej Ruszczycki; Andre Zeug; Dariusz Plewczynski; Punam Kumar Saha; Evgeni Ponimaskin; Jakub Wlodarczyk; Subhadip Basu (Neuroinformatics, 2022)

Correction to: 3dSpAn: An interactive software for 3D segmentation and analysis of dendritic spines. - Nirmal Das; Ewa Baczynska; Monika Bijata; Blazej Ruszczycki; Andre Zeug; Dariusz Plewczynski; Punam Kumar Saha; Evgeni Ponimaskin; Jakub Wlodarczyk; Subhadip Basu (Neuroinformatics, 2022)

2dSpAn-Auto: an automated tool for analysis of two-dimensional dendritic spine images. - Shauvik Paul; Rahul Pramanick; Nirmal Das; Ewa Baczynska; Zeinab Bedrood; Tapabrata Chakraborti; Subhadip Basu; Jakub Wlodarczyk (BMC Bioinform., 2025)