What-If Scenario Explorer for Performance and Scalability Simulations. - Mikio Nagasawa; Daisuke Nishioka; Tsuneyuki Imaki; Satoru Watanabe; Yoshio Suzuki; Fabian Sievers (Parallel Distributed Comput. Pract., 2000)

Haplotype frequency estimation error analysis in the presence of missing genotype data. - Enda D. Kelly; Fabian Sievers; Ross McManus (BMC Bioinform., 2004)

Sequence embedding for fast construction of guide trees for multiple sequence alignment. - Gordon Blackshields; Fabian Sievers; Weifeng Shi; Andreas Wilm; Desmond G. Higgins (Algorithms Mol. Biol., 2010)

Making automated multiple alignments of very large numbers of protein sequences. - Fabian Sievers; David Dineen; Andreas Wilm; Desmond G. Higgins (Bioinform., 2013)

Systematic exploration of guide-tree topology effects for small protein alignments. - Fabian Sievers; Graham M. Hughes; Desmond G. Higgins (BMC Bioinform., 2014)

Instability in progressive multiple sequence alignment algorithms. - Kieran Boyce; Fabian Sievers; Desmond G. Higgins (Algorithms Mol. Biol., 2015)

OD-seq: outlier detection in multiple sequence alignments. - Peter Jehl; Fabian Sievers; Desmond G. Higgins (BMC Bioinform., 2015)

Using de novo protein structure predictions to measure the quality of very large multiple sequence alignments. - Gearoid Fox; Fabian Sievers; Desmond G. Higgins (Bioinform., 2016)

Protein multiple sequence alignment benchmarking through secondary structure prediction. - Quan Le; Fabian Sievers; Desmond G. Higgins (Bioinform., 2017)

QuanTest2: benchmarking multiple sequence alignments using secondary structure prediction. - Fabian Sievers; Desmond G. Higgins (Bioinform., 2020)