Optimal spliced alignments of short sequence reads. - Fabio De Bona; Stephan Ossowski; Korbinian Schneeberger; Gunnar Rätsch (ECCB, 2008)

Learning Dense Models of Query Similarity from User Click Logs. - Fabio De Bona; Stefan Riezler; Keith B. Hall; Massimiliano Ciaramita; Amac Herdagdelen; Maria Holmqvist (HLT-NAACL, 2010)

The SHOGUN Machine Learning Toolbox. - Sören Sonnenburg; Gunnar Rätsch; Sebastian Henschel; Christian Widmer; Jonas Behr; Alexander Zien; Fabio De Bona; Alexander Binder; Christian Gehl; Vojtech Franc (J. Mach. Learn. Res., 2010)

Explore-exploit in top-N recommender systems via Gaussian processes. - Hastagiri P. Vanchinathan; Isidor Nikolic; Fabio De Bona; Andreas Krause 001 (RecSys, 2014)