An Abstract Annotation Model for Skeletons. - Marco Aldinucci; Sonia Campa; Peter Kilpatrick; Fabio Tordini; Massimo Torquati (FMCO, 2011)

Parallel Stochastic Simulators in System Biology: The Evolution of the Species. - Marco Aldinucci; Maurizio Drocco; Fabio Tordini; Mario Coppo; Massimo Torquati (PDP, 2013)

NuChart-II: A Graph-Based Approach for Analysis and Interpretation of Hi-C Data. - Fabio Tordini; Maurizio Drocco; Ivan Merelli; Luciano Milanesi; Pietro Liò; Marco Aldinucci (CIBB, 2014)

Exercising High-Level Parallel Programming on Streams: A Systems Biology Use Case. - Marco Aldinucci; Maurizio Drocco; Guilherme Peretti Pezzi; Claudia Misale; Fabio Tordini; Massimo Torquati (ICDCS Workshops, 2014)

NuchaRt: Embedding High-Level Parallel Computing in R for Augmented Hi-C Data Analysis. - Fabio Tordini; Ivan Merelli; Pietro Liò; Luciano Milanesi; Marco Aldinucci (CIBB, 2015)

Memory-Optimised Parallel Processing of Hi-C Data. - Maurizio Drocco; Claudia Misale; Guilherme Peretti Pezzi; Fabio Tordini; Marco Aldinucci (PDP, 2015)

Parallel Exploration of the Nuclear Chromosome Conformation with NuChart-II. - Fabio Tordini; Maurizio Drocco; Claudia Misale; Luciano Milanesi; Pietro Liò; Ivan Merelli; Marco Aldinucci (PDP, 2015)

A Cloud Solution for Multi-omics Data Integration. - Fabio Tordini (UIC/ATC/ScalCom/CBDCom/IoP/SmartWorld, 2016)

Scientific Workflows on Clouds with Heterogeneous and Preemptible Instances. - Fabio Tordini; Marco Aldinucci; Paolo Viviani 001; Ivan Merelli; Pietro Liò (PARCO, 2017)

NuChart-II: The road to a fast and scalable tool for Hi-C data analysis. - Fabio Tordini; Maurizio Drocco; Claudia Misale; Luciano Milanesi; Pietro Liò; Ivan Merelli; Massimo Torquati; Marco Aldinucci (Int. J. High Perform. Comput. Appl., 2017)

ParallNormal: An Efficient Variant Calling Pipeline for Unmatched Sequencing Data. - Laura Follia; Fabio Tordini; Simone Pernice; Greta Romano; Giulia Beatrice Piaggeschi; Giulio Ferrero (PDP, 2018)

Exploiting Docker containers over Grid computing for a comprehensive study of chromatin conformation in different cell types. - Ivan Merelli; Federico Fornari; Fabio Tordini; Daniele D'Agostino; Marco Aldinucci; Daniele Cesini (J. Parallel Distributed Comput., 2019)

Challenging the abstraction penalty in parallel patterns libraries. - José Daniel García; David del Rio Astorga; Marco Aldinucci; Fabio Tordini; Marco Danelutto; Gabriele Mencagli; Massimo Torquati (J. Supercomput., 2020)